RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 KLHDC7BQ96G42 594 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 KIF2CQ99661 725 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 PDGFDQ9GZP0 370 aaPredicted RBP9.28□□□□□ -0.92
SMC6-209ENST00000489535 HMG20BQ9P0W2 317 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 ZNF804BA4D1E1 1349 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 XDHP47989 1333 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 CCDC171Q6TFL3 1326 aa9.28□□□□□ -0.92
SMC6-209ENST00000489535 COL1A1P02452 1464 aaPredicted RBP9.28□□□□□ -0.92
SMC6-209ENST00000489535 BBOX1O75936 387 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 SMNDC1O75940 238 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMC6-209ENST00000489535 CHGBP05060 677 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 F13BP05160 661 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 CYP2E1P05181 493 aaPredicted RBP9.27□□□□□ -0.93
SMC6-209ENST00000489535 ZFYP08048 801 aaPredicted RBP9.27□□□□□ -0.93
SMC6-209ENST00000489535 SRGNP10124 158 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 NPR1P16066 1061 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 JUNBP17275 347 aaPredicted RBP9.27□□□□□ -0.93
SMC6-209ENST00000489535 PTH1RQ03431 593 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 RASGRF1Q13972 1273 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 MCMDC2Q4G0Z9 681 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 ZSCAN25Q6NSZ9 544 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 CCDC129Q6ZRS4 1044 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 TICAM2Q86XR7 235 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 C2CD5Q86YS7 1000 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 SPATA5Q8NB90 893 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 FBXL18Q96ME1 805 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 SEC62Q99442 399 aaKnown RBP9.27□□□□□ -0.93
SMC6-209ENST00000489535 PIH1D3Q9NQM4 214 aaKnown RBP9.27□□□□□ -0.93
SMC6-209ENST00000489535 HELLSQ9NRZ9 838 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 GNL3LQ9NVN8 582 aaKnown RBP9.27□□□□□ -0.93
SMC6-209ENST00000489535 LEMD3Q9Y2U8 911 aa9.27□□□□□ -0.93
SMC6-209ENST00000489535 MAFBQ9Y5Q3 323 aaPredicted RBP9.27□□□□□ -0.93
SMC6-209ENST00000489535 DICER1Q9UPY3 1922 aaKnown RBP9.27□□□□□ -0.93
SMC6-209ENST00000489535 C10orf71Q711Q0 1435 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 KLRK1P26718 216 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 ALDH1B1P30837 517 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 HSPA4P34932 840 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 GPSM2P81274 684 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 RABEP1Q15276 862 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 TMC4Q7Z404 712 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 ZNF589Q86UQ0 364 aaPredicted RBP9.26□□□□□ -0.93
SMC6-209ENST00000489535 VSIG10LQ86VR7 867 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 ZNF622Q969S3 477 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMC6-209ENST00000489535 MASTLQ96GX5 879 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 FAM84BQ96KN1 310 aaPredicted RBP9.26□□□□□ -0.93
SMC6-209ENST00000489535 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMC6-209ENST00000489535 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 TFIP11Q9UBB9 837 aaKnown RBP9.26□□□□□ -0.93
SMC6-209ENST00000489535 PALD1Q9ULE6 856 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 MYH15Q9Y2K3 1946 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 MAST3O60307 1309 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 IRS2Q9Y4H2 1338 aa9.26□□□□□ -0.93
SMC6-209ENST00000489535 TCHHQ07283 1943 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 H0YIN7 160 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 M0R2C6 588 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 IDH1O75874 414 aaKnown RBP9.25□□□□□ -0.93
SMC6-209ENST00000489535 UFL1O94874 794 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 ATP2B4P23634 1241 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 HIBADHP31937 336 aaKnown RBP9.25□□□□□ -0.93
SMC6-209ENST00000489535 ADD2P35612 726 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 ANAPC15P60006 121 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 HYAL2Q12891 473 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 FAM117BQ6P1L5 589 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 FBXO33Q7Z6M2 555 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 HSCBQ8IWL3 235 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 SP8Q8IXZ3 490 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 APPBP2Q92624 585 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 VTI1AQ96AJ9 217 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 RNF208Q9H0X6 261 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 SH2B1Q9NRF2 756 aaPredicted RBP9.25□□□□□ -0.93
SMC6-209ENST00000489535 DENND2AQ9ULE3 1009 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 RBM8AQ9Y5S9 174 aaKnown RBP9.25□□□□□ -0.93
SMC6-209ENST00000489535 TIAM2Q8IVF5 1701 aa9.25□□□□□ -0.93
SMC6-209ENST00000489535 FRAT2O75474 233 aaPredicted RBP9.24□□□□□ -0.93
SMC6-209ENST00000489535 MAP4P27816 1152 aaKnown RBP9.24□□□□□ -0.93
SMC6-209ENST00000489535 STYK1Q6J9G0 422 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
SMC6-209ENST00000489535 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 TP53INP2Q8IXH6 220 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 MAP4K1Q92918 833 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 OSBP2Q969R2 916 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 SNX21Q969T3 373 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
SMC6-209ENST00000489535 PODXL2Q9NZ53 605 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 WWC3Q9ULE0 1092 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 ATP6V0A2Q9Y487 856 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 SNX14Q9Y5W7 946 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 ZNF532Q9HCE3 1301 aa9.24□□□□□ -0.93
SMC6-209ENST00000489535 SBF1O95248 1867 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 DDX60LQ5H9U9 1706 aaKnown RBP9.23□□□□□ -0.93
SMC6-209ENST00000489535 RAD21O60216 631 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 PDE6AP16499 860 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 CHRNA5P30532 468 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 MAP3K12Q12852 859 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 CHAF1AQ13111 956 aaPredicted RBP9.23□□□□□ -0.93
SMC6-209ENST00000489535 UBE3CQ15386 1083 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 CPSF6Q16630 551 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMC6-209ENST00000489535 FBLN7Q53RD9 439 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 SLC9C2Q5TAH2 1124 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms