RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 NYAP1Q6ZVC0 841 aa20.49■□□□□ 0.87
POLR2J3-205ENST00000489144 ZCCHC17Q9NP64 241 aaKnown RBP20.49■□□□□ 0.87
POLR2J3-205ENST00000489144 F5H6K3 240 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 YBX3P16989 372 aaKnown RBP eCLIP20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 KLRC3Q07444 240 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 INF2Q27J81 1249 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 FMR1NBQ8N0W7 255 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 BIN2Q9UBW5 565 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 SMCO2A6NFE2 343 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 KINO60870 393 aaKnown RBP20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 NDUFB10O96000 172 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 ASPRV1Q53RT3 343 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 JAKMIP3Q5VZ66 844 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 LEKR1Q6ZMV7 388 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 SYT17Q9BSW7 474 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 DDX19AQ9NUU7 478 aaKnown RBP20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 PCDHA6Q9UN73 950 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 PCDHA4Q9UN74 947 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 PCDHA8Q9Y5H6 950 aa20.48■□□□□ 0.87
POLR2J3-205ENST00000489144 TRIM75PA6NK02 468 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 EPS15P42566 896 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 NT5C2P49902 561 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 KIF4BQ2VIQ3 1234 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 PDILTQ8N807 584 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 LMAN1P49257 510 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 TTC38Q5R3I4 469 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 ISM2Q6H9L7 571 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 METTL16Q86W50 562 aaKnown RBP20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 BORCS6Q96GS4 357 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 RIOX1Q9H6W3 641 aa20.47■□□□□ 0.87
POLR2J3-205ENST00000489144 DDNO94850 711 aaPredicted RBP20.46■□□□□ 0.87
POLR2J3-205ENST00000489144 ZNF280AP59817 542 aaPredicted RBP20.46■□□□□ 0.87
POLR2J3-205ENST00000489144 UBE2SQ16763 222 aa20.46■□□□□ 0.87
POLR2J3-205ENST00000489144 MTMR14Q8NCE2 650 aa20.46■□□□□ 0.87
POLR2J3-205ENST00000489144 UIMC1Q96RL1 719 aa20.46■□□□□ 0.87
POLR2J3-205ENST00000489144 FBXO2Q9UK22 296 aaPredicted RBP20.46■□□□□ 0.87
POLR2J3-205ENST00000489144 ZBTB21Q9ULJ3 1066 aa20.46■□□□□ 0.87
POLR2J3-205ENST00000489144 LZTS2Q9BRK4 669 aa20.46■□□□□ 0.87
POLR2J3-205ENST00000489144 PRKG1Q13976 671 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 NBPF12Q5TAG4 269 aaPredicted RBP20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 ANGEL2Q5VTE6 544 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 FILIP1Q7Z7B0 1213 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 KRI1Q8N9T8 703 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 SDF4Q9BRK5 362 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 CSRNP2Q9H175 543 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 LTBP3Q9NS15 1303 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 NYAP2Q9P242 653 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 PGAP2Q9UHJ9 254 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 HERC5Q9UII4 1024 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 BIN1O00499 593 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 ZNF202O95125 648 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 TYRO3Q06418 890 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 ITFG2Q969R8 447 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 ADAM21Q9UKJ8 722 aa20.45■□□□□ 0.86
POLR2J3-205ENST00000489144 CCDC194A0A1B0GVG4 234 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 TMEM232C9JQI7 657 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 H0YHG0 523 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 PPP6R2O75170 966 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 CDC25AP30304 524 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 SARNPP82979 210 aaKnown RBP20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 PTGDRQ13258 359 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 USH1GQ495M9 461 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 DRC7Q8IY82 874 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 DEFB129Q9H1M3 183 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 RNF181Q9P0P0 153 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 ARFGEF1Q9Y6D6 1849 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 A0A1W2PQ27 194 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 A0A1W2PQ64 194 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 A0A1W2PQD8 194 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 VWA3AA6NCI4 1184 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 FOXN1O15353 648 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 RPS6KA5O75582 802 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 SMC1AQ14683 1233 aaKnown RBP20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 EPSTI1Q96J88 318 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 TEPSINQ96N21 525 aa20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 TACO1Q9BSH4 297 aaKnown RBP20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.44■□□□□ 0.86
POLR2J3-205ENST00000489144 CALML3P27482 149 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 NRBP1Q9UHY1 535 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 M0R2N6 131 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 TPM1P09493 284 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 LMNB1P20700 586 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 CMA1P23946 247 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 SYKP43405 635 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 ZRSR1Q15695 479 aaKnown RBP20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 ANO6Q4KMQ2 910 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 ARHGAP29Q52LW3 1261 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 EFCAB13Q8IY85 973 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 GRAMD1CQ8IYS0 662 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 OTUD6BQ8N6M0 293 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 DNAJC25Q9H1X3 360 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 L2HGDHQ9H9P8 463 aa20.43■□□□□ 0.86
POLR2J3-205ENST00000489144 RPS12P25398 132 aaKnown RBP20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 SETQ01105 290 aaPredicted RBP20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 QRICH1Q2TAL8 776 aa20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 FAM83BQ5T0W9 1011 aa20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 FAM83AQ86UY5 434 aa20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 CCDC148Q8NFR7 591 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms