RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 EMC9Q9Y3B6 208 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 BACE2Q9Y5Z0 518 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 KIF21AQ7Z4S6 1674 aa4.1□□□□□ -1.75
CALD1-221ENST00000489019 TEX51A0A1B0GUA7 166 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 NUDT19A8MXV4 375 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 TBX1O43435 398 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 PPP1R11O60927 126 aaPredicted RBP4.09□□□□□ -1.75
CALD1-221ENST00000489019 TBC1D8O95759 1140 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 ZNF143P52747 638 aaPredicted RBP4.09□□□□□ -1.75
CALD1-221ENST00000489019 YBX1P67809 324 aaKnown RBP4.09□□□□□ -1.75
CALD1-221ENST00000489019 DLG4P78352 724 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 SRSF3P84103 164 aaKnown RBP4.09□□□□□ -1.75
CALD1-221ENST00000489019 AMPD2Q01433 879 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 LAPTM5Q13571 262 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 CPNE8Q86YQ8 564 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 JAMLQ86YT9 394 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 HNRNPLLQ8WVV9 542 aaKnown RBP4.09□□□□□ -1.75
CALD1-221ENST00000489019 COPS5Q92905 334 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 MRGPRX3Q96LB0 322 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 FBLN5Q9UBX5 448 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 SMG5Q9UPR3 1016 aaKnown RBP4.09□□□□□ -1.75
CALD1-221ENST00000489019 TDRD9Q8NDG6 1382 aaKnown RBP4.09□□□□□ -1.75
CALD1-221ENST00000489019 FHAD1B1AJZ9 1412 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 GAPVD1Q14C86 1478 aa4.09□□□□□ -1.75
CALD1-221ENST00000489019 NPIPB6E9PJ23 425 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 HRKO00198 91 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 SUSD5O60279 629 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 IGSF3O75054 1194 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 SEMA7AO75326 666 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 DDAH1O94760 285 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 GJB6O95452 261 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 MPOP05164 745 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 TACR1P25103 407 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 L1CAMP32004 1257 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 ARL4AP40617 200 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 SEPHS1P49903 392 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 EPHB3P54753 998 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 SCRN1Q12765 414 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 KCNA10Q16322 511 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 MBLAC2Q68D91 279 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 GTF2IRD2BQ6EKJ0 949 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 RPTNQ6XPR3 784 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 GTF2IRD2Q86UP8 949 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 ANKLE2Q86XL3 938 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 TRIM59Q8IWR1 403 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 CELF2-AS1Q8N7Q2 184 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 CTTNBP2Q8WZ74 1663 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 PPP1R14AQ96A00 147 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 CNTD2Q9H8S5 307 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 GPRC5CQ9NQ84 441 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 PLA2G2DQ9UNK4 145 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 HCFC2Q9Y5Z7 792 aa4.08□□□□□ -1.76
CALD1-221ENST00000489019 WDR97A6NE52 1622 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 MRC2Q9UBG0 1479 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 FHOD3Q2V2M9 1422 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 A0A1W2PQ27 194 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 A0A1W2PQ64 194 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 A0A1W2PQC6 194 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 A0A1W2PQD8 194 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 TCAF2A6NFQ2 919 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 KLF4O43474 513 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 ITGAVP06756 1048 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 THBDP07204 575 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 DBHP09172 617 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 CORO7P57737 925 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 LINC00310P59036 64 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 CBX2Q14781 532 aaPredicted RBP4.07□□□□□ -1.76
CALD1-221ENST00000489019 RAB3GAP1Q15042 981 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 SF1Q15637 639 aaKnown RBP4.07□□□□□ -1.76
CALD1-221ENST00000489019 FXNQ16595 210 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 TMEM132EQ6IEE7 984 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 POMZP3Q6PJE2 187 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 SPOCD1Q6ZMY3 1216 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 LCNL1Q6ZST4 164 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 ANKS3Q6ZW76 656 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 TMC6Q7Z403 805 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 ZNF227Q86WZ6 799 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 LRRC56Q8IYG6 542 aaPredicted RBP4.07□□□□□ -1.76
CALD1-221ENST00000489019 NLGN2Q8NFZ4 835 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 BTN2A2Q8WVV5 523 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 TOX2Q96NM4 488 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 NKX2-4Q9H2Z4 354 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 PDLIM7Q9NR12 457 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 ST7Q9NRC1 585 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 CLEC1BQ9P126 229 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 RWDD3Q9Y3V2 267 aa4.07□□□□□ -1.76
CALD1-221ENST00000489019 TIAM1Q13009 1591 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 EFCAB5A4FU69 1503 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 ERCC6Q03468 1493 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 FMN1Q68DA7 1419 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 CCNB3Q8WWL7 1395 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 NPHP3-ACAD11A0A0J9YXS1 232 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 C7orf72A4D263 438 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 ARNTLO00327 626 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 NOP56O00567 594 aaKnown RBP4.06□□□□□ -1.76
CALD1-221ENST00000489019 SRGAP3O43295 1099 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 CAPNS1P04632 268 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 GLI4P10075 376 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 NAT2P11245 290 aa4.06□□□□□ -1.76
CALD1-221ENST00000489019 PLS3P13797 630 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms