RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 RILPL1Q5EBL4 403 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 JAKMIP3Q5VZ66 844 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 USP17L6PQ6QN14 398 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 SHCBP1Q8NEM2 672 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 SMCR8Q8TEV9 937 aaPredicted RBP18.32■□□□□ 0.52
CLDN11-208ENST00000488989 TBC1D5Q92609 795 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 PAGR1Q9BTK6 254 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 MOV10L1Q9BXT6 1211 aaKnown RBP18.32■□□□□ 0.52
CLDN11-208ENST00000488989 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 CCDC194A0A1B0GVG4 234 aa18.31■□□□□ 0.52
CLDN11-208ENST00000488989 FAM205CA6NFA0 338 aa18.31■□□□□ 0.52
CLDN11-208ENST00000488989 TOB1P50616 345 aaPredicted RBP18.31■□□□□ 0.52
CLDN11-208ENST00000488989 DNM1Q05193 864 aaKnown RBP18.31■□□□□ 0.52
CLDN11-208ENST00000488989 PLS1Q14651 629 aa18.31■□□□□ 0.52
CLDN11-208ENST00000488989 NONOQ15233 471 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLDN11-208ENST00000488989 PIK3AP1Q6ZUJ8 805 aa18.31■□□□□ 0.52
CLDN11-208ENST00000488989 PAXIP1Q6ZW49 1069 aaPredicted RBP18.31■□□□□ 0.52
CLDN11-208ENST00000488989 ZNF396Q96N95 335 aaPredicted RBP18.31■□□□□ 0.52
CLDN11-208ENST00000488989 TMEM260Q9NX78 707 aa18.31■□□□□ 0.52
CLDN11-208ENST00000488989 FBXO40Q9UH90 709 aa18.31■□□□□ 0.52
CLDN11-208ENST00000488989 PEX10O60683 326 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 CFBP00751 764 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 KRT85P78386 507 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 TAF1CQ15572 869 aaPredicted RBP18.3■□□□□ 0.52
CLDN11-208ENST00000488989 FAM110CQ1W6H9 321 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 GPRC5AQ8NFJ5 357 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 GBP4Q96PP9 640 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 USP28Q96RU2 1077 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 ANO3Q9BYT9 981 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 HOMER2Q9NSB8 354 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 NOL7Q9UMY1 257 aaKnown RBP18.3■□□□□ 0.52
CLDN11-208ENST00000488989 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
CLDN11-208ENST00000488989 AOC2O75106 756 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 ALDH1A1P00352 501 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 BCRP11274 1271 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 MAP2K2P36507 400 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 RPS6P62753 249 aaKnown RBP18.29■□□□□ 0.52
CLDN11-208ENST00000488989 CRYGNQ8WXF5 182 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 CHAMP1Q96JM3 812 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 MROH8Q9H579 483 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 POLR3EQ9NVU0 708 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 RTEL1Q9NZ71 1219 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 CFAP45Q9UL16 551 aa18.29■□□□□ 0.52
CLDN11-208ENST00000488989 FRMPD4Q14CM0 1322 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 SPDYE3A6NKU9 549 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 EDIL3O43854 480 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 TLR2O60603 784 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 ERCC3P19447 782 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 HOXA13P31271 388 aaPredicted RBP18.28■□□□□ 0.52
CLDN11-208ENST00000488989 NASPP49321 788 aaPredicted RBP18.28■□□□□ 0.52
CLDN11-208ENST00000488989 CCNA1P78396 465 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 INF2Q27J81 1249 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 FOXD4L6Q3SYB3 417 aaPredicted RBP18.28■□□□□ 0.52
CLDN11-208ENST00000488989 C17orf99Q6UX52 265 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 FOXD4L3Q6VB84 417 aaPredicted RBP18.28■□□□□ 0.52
CLDN11-208ENST00000488989 RNF207Q6ZRF8 634 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 ANKRD13CQ8N6S4 541 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 SYTL5Q8TDW5 730 aaPredicted RBP18.28■□□□□ 0.52
CLDN11-208ENST00000488989 TBCKQ8TEA7 893 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 ZFYVE28Q9HCC9 887 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 A1CFQ9NQ94 594 aaKnown RBP18.28■□□□□ 0.52
CLDN11-208ENST00000488989 MORC2Q9Y6X9 1032 aaPredicted RBP18.28■□□□□ 0.52
CLDN11-208ENST00000488989 DOCK3Q8IZD9 2030 aa18.28■□□□□ 0.52
CLDN11-208ENST00000488989 RPTORQ8N122 1335 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 MGAMO43451 1857 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 PLXNA1Q9UIW2 1896 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 CA12O43570 354 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 SREBF1P36956 1147 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 GRM1Q13255 1194 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 ORC2Q13416 577 aaPredicted RBP18.27■□□□□ 0.52
CLDN11-208ENST00000488989 ANO1Q5XXA6 986 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 NEK8Q86SG6 692 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 PGBD1Q96JS3 809 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.27■□□□□ 0.52
CLDN11-208ENST00000488989 CYP39A1Q9NYL5 469 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 COL20A1Q9P218 1284 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 ZNF236Q9UL36 1845 aa18.27■□□□□ 0.52
CLDN11-208ENST00000488989 PFASO15067 1338 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 WNT7AO00755 349 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 YEATS4O95619 227 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 CYP3A4P08684 503 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 VEGFBP49765 207 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 USP11P51784 963 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 BAATQ14032 418 aaPredicted RBP18.26■□□□□ 0.51
CLDN11-208ENST00000488989 TTC38Q5R3I4 469 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 MOXD1Q6UVY6 613 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 NSMFQ6X4W1 530 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 TMEM87AQ8NBN3 555 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 CFHR5Q9BXR6 569 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 SCAND2PQ9GZW5 306 aaPredicted RBP18.26■□□□□ 0.51
CLDN11-208ENST00000488989 PORCNQ9H237 461 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 EHMT1Q9H9B1 1298 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 TFIP11Q9UBB9 837 aaKnown RBP18.26■□□□□ 0.51
CLDN11-208ENST00000488989 RCOR1Q9UKL0 485 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 PCDHB6Q9Y5E3 794 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 CLIC4Q9Y696 253 aa18.26■□□□□ 0.51
CLDN11-208ENST00000488989 PTPAQ15257 358 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms