RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 CPP00450 1065 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 PRPHP41219 470 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 KLK7P49862 253 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 FAM47AQ5JRC9 791 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 CCDC42Q96M95 316 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 PLEKHA4Q9H4M7 779 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 UBAP1LF5GYI3 381 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 TACC1O75410 805 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 HNRNPH3P31942 346 aaKnown RBP21.71■■□□□ 1.07
HMG20B-213ENST00000488973 CYP27A1Q02318 531 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 PCMTD1Q96MG8 357 aaPredicted RBP21.71■■□□□ 1.07
HMG20B-213ENST00000488973 TMEM60Q9H2L4 133 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 SUFUQ9UMX1 484 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 CASZ1Q86V15 1759 aa21.71■■□□□ 1.07
HMG20B-213ENST00000488973 NTSR2O95665 410 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 MTIF2P46199 727 aaKnown RBP21.7■■□□□ 1.06
HMG20B-213ENST00000488973 PPFIA1Q13136 1202 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 CAVIN4Q5BKX8 364 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 MIIPQ5JXC2 388 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 ANKRD40Q6AI12 368 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 NOC4LQ9BVI4 516 aaKnown RBP21.7■■□□□ 1.06
HMG20B-213ENST00000488973 COL4A1P02462 1669 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 GALNT17Q6IS24 598 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 RCSD1Q6JBY9 416 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 GBP6Q6ZN66 633 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 MARCH10Q8NA82 808 aaPredicted RBP21.7■■□□□ 1.06
HMG20B-213ENST00000488973 DAGLBQ8NCG7 672 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 KAT14Q9H8E8 782 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 DCP1AQ9NPI6 582 aaPredicted RBP21.7■■□□□ 1.06
HMG20B-213ENST00000488973 LRWD1Q9UFC0 647 aa21.7■■□□□ 1.06
HMG20B-213ENST00000488973 A0A087WUV0 522 aaPredicted RBP21.69■■□□□ 1.06
HMG20B-213ENST00000488973 GOLGA8KD6RF30 607 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 ZNF263O14978 683 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 IRAK1P51617 712 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 FKBP15Q5T1M5 1219 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 RASGRP4Q8TDF6 673 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 GPKOWQ92917 476 aaPredicted RBP eCLIP21.69■■□□□ 1.06
HMG20B-213ENST00000488973 SH3GL2Q99962 352 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 ATP8A2Q9NTI2 1148 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 PCDHA6Q9UN73 950 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 PLAGL2Q9UPG8 496 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 PCDHA8Q9Y5H6 950 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 CCDC88AQ3V6T2 1871 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 TSPY2A6NKD2 308 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 SF3B2Q13435 895 aaKnown RBP21.69■■□□□ 1.06
HMG20B-213ENST00000488973 CCDC96Q2M329 555 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 SBK1Q52WX2 424 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 AK8Q96MA6 479 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 CRNKL1Q9BZJ0 848 aaKnown RBP21.69■■□□□ 1.06
HMG20B-213ENST00000488973 SH2D4AQ9H788 454 aa21.69■■□□□ 1.06
HMG20B-213ENST00000488973 ARPP21Q9UBL0 812 aaPredicted RBP21.69■■□□□ 1.06
HMG20B-213ENST00000488973 LCA5LO95447 670 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 EVX2Q03828 476 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 PDE4DQ08499 809 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 COBLL1Q53SF7 1204 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 RPAINQ86UA6 219 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 NSUN4Q96CB9 384 aaKnown RBP21.68■■□□□ 1.06
HMG20B-213ENST00000488973 C7orf25Q9BPX7 421 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 TRIM9Q9C026 710 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 INTS5Q6P9B9 1019 aaKnown RBP21.68■■□□□ 1.06
HMG20B-213ENST00000488973 SND1Q7KZF4 910 aaKnown RBP eCLIP21.68■■□□□ 1.06
HMG20B-213ENST00000488973 TADA2BQ86TJ2 420 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 SPATA4Q8NEY3 305 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 LRRC15Q8TF66 581 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 CEP89Q96ST8 783 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 PLIN2Q99541 437 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 LRRC1Q9BTT6 524 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 IFIH1Q9BYX4 1025 aaKnown RBP21.68■■□□□ 1.06
HMG20B-213ENST00000488973 PCDHA13Q9Y5I0 950 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 DOT1LQ8TEK3 1739 aa21.68■■□□□ 1.06
HMG20B-213ENST00000488973 FLT1P17948 1338 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 OPA1O60313 960 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 CAMTA2O94983 1202 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 TCP1P17987 556 aaKnown RBP21.67■■□□□ 1.06
HMG20B-213ENST00000488973 CAPN6Q9Y6Q1 641 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 TAF1P21675 1872 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 NT5C2P49902 561 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 INF2Q27J81 1249 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 MCTP2Q6DN12 878 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 TYW1BQ6NUM6 668 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 KRT26Q7Z3Y9 468 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 CAPS2Q9BXY5 557 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 TCP11L1Q9NUJ3 509 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 CCDC87Q9NVE4 849 aa21.67■■□□□ 1.06
HMG20B-213ENST00000488973 DMGDHQ9UI17 866 aaKnown RBP21.67■■□□□ 1.06
HMG20B-213ENST00000488973 ANKRD65E5RJM6 399 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 EPB41P11171 864 aaKnown RBP21.66■■□□□ 1.06
HMG20B-213ENST00000488973 PLCG1P19174 1290 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 ATP6V1AP38606 617 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 GNAQP50148 359 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 EPHB4P54760 987 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 STK4Q13043 487 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 EMBQ6PCB8 327 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.66■■□□□ 1.06
HMG20B-213ENST00000488973 CABP7Q86V35 215 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 DGKHQ86XP1 1220 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 FAM84BQ96KN1 310 aaPredicted RBP21.66■■□□□ 1.06
HMG20B-213ENST00000488973 OSBPL9Q96SU4 736 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 NIP7Q9Y221 180 aaKnown RBP eCLIP21.66■■□□□ 1.06
HMG20B-213ENST00000488973 MAST2Q6P0Q8 1798 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms