RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 BLIDQ8IZY5 108 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 REXO1Q8N1G1 1221 aaKnown RBP14.13□□□□□ -0.15
TRAIP-209ENST00000488860 FBXO18Q8NFZ0 1043 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 BICD2Q8TD16 824 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 RASGRP4Q8TDF6 673 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 FOXD4L4Q8WXT5 416 aaPredicted RBP14.13□□□□□ -0.15
TRAIP-209ENST00000488860 TBC1D5Q92609 795 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 CFHR5Q9BXR6 569 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 ZMYND12Q9H0C1 365 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 A1CFQ9NQ94 594 aaKnown RBP14.13□□□□□ -0.15
TRAIP-209ENST00000488860 TMEM260Q9NX78 707 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 PCDHA4Q9UN74 947 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 CASP8AP2Q9UKL3 1982 aa14.13□□□□□ -0.15
TRAIP-209ENST00000488860 FCER1AP12319 257 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 SP3Q02447 781 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 KCTD2Q14681 263 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 KIF22Q14807 665 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 JAKMIP3Q5VZ66 844 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 USP17L6PQ6QN14 398 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 PLEKHH3Q7Z736 793 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 FAM177A1Q8N128 213 aaPredicted RBP14.12□□□□□ -0.15
TRAIP-209ENST00000488860 DAGLBQ8NCG7 672 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 OXER1Q8TDS5 423 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 PGBD1Q96JS3 809 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 GLT8D2Q9H1C3 349 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 BIN2Q9UBW5 565 aaPredicted RBP14.12□□□□□ -0.15
TRAIP-209ENST00000488860 PCNTO95613 3336 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 PFASO15067 1338 aa14.12□□□□□ -0.15
TRAIP-209ENST00000488860 KIAA1217Q5T5P2 1943 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 SPDYE3A6NKU9 549 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 GPR25O00155 361 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 TNPO2O14787 897 aaKnown RBP14.11□□□□□ -0.15
TRAIP-209ENST00000488860 HSD17B4P51659 736 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 FCGRTP55899 365 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
TRAIP-209ENST00000488860 LACTBP83111 547 aaPredicted RBP14.11□□□□□ -0.15
TRAIP-209ENST00000488860 NR5A1Q13285 461 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 PKP1Q13835 747 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 BAATQ14032 418 aaPredicted RBP14.11□□□□□ -0.15
TRAIP-209ENST00000488860 NPY5RQ15761 445 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 GALNT17Q6IS24 598 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 FERMT3Q86UX7 667 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 CD99L2Q8TCZ2 262 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 ARHGAP39Q9C0H5 1083 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 CYP39A1Q9NYL5 469 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
TRAIP-209ENST00000488860 BTBD18B2RXH4 712 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 KIF28PB7ZC32 967 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 POTEB2H3BUK9 544 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 MEIS2O14770 477 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 PGK2P07205 417 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 ADORA2AP29274 412 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 PSMC4P43686 418 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 SYTL5Q8TDW5 730 aaPredicted RBP14.1□□□□□ -0.15
TRAIP-209ENST00000488860 PURBQ96QR8 312 aaKnown RBP14.1□□□□□ -0.15
TRAIP-209ENST00000488860 WBP1LQ9NX94 342 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 COL20A1Q9P218 1284 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 PCDHA6Q9UN73 950 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 PCDHA8Q9Y5H6 950 aa14.1□□□□□ -0.15
TRAIP-209ENST00000488860 TCHHQ07283 1943 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 CCDC194A0A1B0GVG4 234 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 PIK3CDO00329 1044 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 FKTNO75072 461 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 PTPREP23469 700 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 CTGFP29279 349 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 CLK2P49760 499 aaKnown RBP14.09□□□□□ -0.15
TRAIP-209ENST00000488860 AP3B2Q13367 1082 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 NOM1Q5C9Z4 860 aaKnown RBP14.09□□□□□ -0.15
TRAIP-209ENST00000488860 PIK3AP1Q6ZUJ8 805 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 ANO3Q9BYT9 981 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 EHMT1Q9H9B1 1298 aa14.09□□□□□ -0.15
TRAIP-209ENST00000488860 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 ZSCAN22P10073 491 aaPredicted RBP14.08□□□□□ -0.16
TRAIP-209ENST00000488860 EIF2AK2P19525 551 aaKnown RBP14.08□□□□□ -0.16
TRAIP-209ENST00000488860 UBXN2AP68543 259 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 CNTN2Q02246 1040 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 GHRHRQ02643 423 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 GRB14Q14449 540 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAIP-209ENST00000488860 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 RGS22Q8NE09 1264 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 ZNF296Q8WUU4 475 aaPredicted RBP14.08□□□□□ -0.16
TRAIP-209ENST00000488860 ERO1AQ96HE7 468 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 TAAR1Q96RJ0 339 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 FOXP1Q9H334 677 aaPredicted RBP14.08□□□□□ -0.16
TRAIP-209ENST00000488860 MAP3K20Q9NYL2 800 aaKnown RBP14.08□□□□□ -0.16
TRAIP-209ENST00000488860 DOCK5Q9H7D0 1870 aa14.08□□□□□ -0.16
TRAIP-209ENST00000488860 SLC15A5A6NIM6 579 aa14.07□□□□□ -0.16
TRAIP-209ENST00000488860 M0R2N6 131 aa14.07□□□□□ -0.16
TRAIP-209ENST00000488860 STRNO43815 780 aa14.07□□□□□ -0.16
TRAIP-209ENST00000488860 F13A1P00488 732 aa14.07□□□□□ -0.16
TRAIP-209ENST00000488860 HSPA1AP0DMV8 641 aaKnown RBP14.07□□□□□ -0.16
TRAIP-209ENST00000488860 HSPA1BP0DMV9 641 aaKnown RBP14.07□□□□□ -0.16
TRAIP-209ENST00000488860 DDIT3P35638 169 aa14.07□□□□□ -0.16
TRAIP-209ENST00000488860 NUCB2P80303 420 aa14.07□□□□□ -0.16
TRAIP-209ENST00000488860 RESTQ13127 1097 aa14.07□□□□□ -0.16
TRAIP-209ENST00000488860 NONOQ15233 471 aaKnown RBP eCLIP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms