RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CYB5R4Q7L1T6 521 aa26.98■■□□□ 1.91
CUL4A-209ENST00000488558 DDX49Q9Y6V7 483 aaKnown RBP26.98■■□□□ 1.91
CUL4A-209ENST00000488558 A0A0U1RQG5 324 aaPredicted RBP26.97■■□□□ 1.91
CUL4A-209ENST00000488558 CABYRO75952 493 aa26.97■■□□□ 1.91
CUL4A-209ENST00000488558 EDNRBP24530 442 aa26.97■■□□□ 1.91
CUL4A-209ENST00000488558 CDK7P50613 346 aa26.97■■□□□ 1.91
CUL4A-209ENST00000488558 USH1GQ495M9 461 aa26.97■■□□□ 1.91
CUL4A-209ENST00000488558 EEPD1Q7L9B9 569 aa26.97■■□□□ 1.91
CUL4A-209ENST00000488558 BADQ92934 168 aa26.97■■□□□ 1.91
CUL4A-209ENST00000488558 AP5M1Q9H0R1 490 aa26.97■■□□□ 1.91
CUL4A-209ENST00000488558 PDGFCQ9NRA1 345 aa26.97■■□□□ 1.91
CUL4A-209ENST00000488558 RBM47A0AV96 593 aaKnown RBP26.96■■□□□ 1.91
CUL4A-209ENST00000488558 FAAP100Q0VG06 881 aa26.96■■□□□ 1.91
CUL4A-209ENST00000488558 FSCN1Q16658 493 aaKnown RBP26.96■■□□□ 1.91
CUL4A-209ENST00000488558 RALYLQ86SE5 291 aaKnown RBP26.96■■□□□ 1.91
CUL4A-209ENST00000488558 MAP4K1Q92918 833 aa26.96■■□□□ 1.91
CUL4A-209ENST00000488558 B4DLN1 442 aa26.95■■□□□ 1.9
CUL4A-209ENST00000488558 MRPL12P52815 198 aaKnown RBP26.95■■□□□ 1.9
CUL4A-209ENST00000488558 QRICH1Q2TAL8 776 aa26.95■■□□□ 1.9
CUL4A-209ENST00000488558 DUSP28Q4G0W2 176 aa26.95■■□□□ 1.9
CUL4A-209ENST00000488558 KIAA1211Q6ZU35 1233 aa26.95■■□□□ 1.9
CUL4A-209ENST00000488558 NCOA7Q8NI08 942 aa26.95■■□□□ 1.9
CUL4A-209ENST00000488558 SEZ6LQ9BYH1 1024 aa26.95■■□□□ 1.9
CUL4A-209ENST00000488558 JMJD4Q9H9V9 463 aa26.95■■□□□ 1.9
CUL4A-209ENST00000488558 TMEM39AQ9NV64 488 aa26.95■■□□□ 1.9
CUL4A-209ENST00000488558 E7EWF7 191 aa26.94■■□□□ 1.9
CUL4A-209ENST00000488558 ARVCFO00192 962 aa26.94■■□□□ 1.9
CUL4A-209ENST00000488558 ZEB2O60315 1214 aa26.94■■□□□ 1.9
CUL4A-209ENST00000488558 BEX3Q00994 111 aa26.94■■□□□ 1.9
CUL4A-209ENST00000488558 TBX21Q9UL17 535 aa26.94■■□□□ 1.9
CUL4A-209ENST00000488558 ERICH2A1L162 156 aa26.93■■□□□ 1.9
CUL4A-209ENST00000488558 DYNC1LI2O43237 492 aaPredicted RBP26.93■■□□□ 1.9
CUL4A-209ENST00000488558 DHX16O60231 1041 aaKnown RBP26.93■■□□□ 1.9
CUL4A-209ENST00000488558 RAG1P15918 1043 aa26.93■■□□□ 1.9
CUL4A-209ENST00000488558 ITGB8P26012 769 aa26.93■■□□□ 1.9
CUL4A-209ENST00000488558 PDE4DQ08499 809 aa26.93■■□□□ 1.9
CUL4A-209ENST00000488558 SART3Q15020 963 aaKnown RBP26.93■■□□□ 1.9
CUL4A-209ENST00000488558 FBXO11Q86XK2 927 aa26.93■■□□□ 1.9
CUL4A-209ENST00000488558 MCF2L2Q86YR7 1114 aa26.93■■□□□ 1.9
CUL4A-209ENST00000488558 MRPL11Q9Y3B7 192 aaKnown RBP26.93■■□□□ 1.9
CUL4A-209ENST00000488558 PALM3A6NDB9 673 aaPredicted RBP26.92■■□□□ 1.9
CUL4A-209ENST00000488558 CENPQQ7L2Z9 268 aaPredicted RBP26.92■■□□□ 1.9
CUL4A-209ENST00000488558 STAG2Q8N3U4 1231 aa26.92■■□□□ 1.9
CUL4A-209ENST00000488558 SLC43A3Q8NBI5 491 aa26.92■■□□□ 1.9
CUL4A-209ENST00000488558 VTI1AQ96AJ9 217 aa26.92■■□□□ 1.9
CUL4A-209ENST00000488558 MTMR8Q96EF0 704 aa26.92■■□□□ 1.9
CUL4A-209ENST00000488558 WDR11Q9BZH6 1224 aa26.92■■□□□ 1.9
CUL4A-209ENST00000488558 MAD2L2Q9UI95 211 aa26.92■■□□□ 1.9
CUL4A-209ENST00000488558 RBM8AQ9Y5S9 174 aaKnown RBP26.92■■□□□ 1.9
CUL4A-209ENST00000488558 TAF6LQ9Y6J9 622 aa26.92■■□□□ 1.9
CUL4A-209ENST00000488558 KLRF2D3W0D1 207 aa26.91■■□□□ 1.9
CUL4A-209ENST00000488558 IFIT3O14879 490 aaKnown RBP26.91■■□□□ 1.9
CUL4A-209ENST00000488558 NKRFO15226 690 aaKnown RBP eCLIP26.91■■□□□ 1.9
CUL4A-209ENST00000488558 CXCL17Q6UXB2 119 aa26.91■■□□□ 1.9
CUL4A-209ENST00000488558 STOX1Q6ZVD7 989 aa26.91■■□□□ 1.9
CUL4A-209ENST00000488558 FAM126BQ8IXS8 530 aa26.91■■□□□ 1.9
CUL4A-209ENST00000488558 AMNQ9BXJ7 453 aa26.91■■□□□ 1.9
CUL4A-209ENST00000488558 TLR3O15455 904 aaKnown RBP26.9■■□□□ 1.9
CUL4A-209ENST00000488558 GRM4Q14833 912 aa26.9■■□□□ 1.9
CUL4A-209ENST00000488558 SHHQ15465 462 aa26.9■■□□□ 1.9
CUL4A-209ENST00000488558 TMEM63BQ5T3F8 832 aa26.9■■□□□ 1.9
CUL4A-209ENST00000488558 SCFD2Q8WU76 684 aa26.9■■□□□ 1.9
CUL4A-209ENST00000488558 TIMP1P01033 207 aa26.89■■□□□ 1.9
CUL4A-209ENST00000488558 GHRHRQ02643 423 aa26.89■■□□□ 1.9
CUL4A-209ENST00000488558 FPGSQ05932 587 aa26.89■■□□□ 1.9
CUL4A-209ENST00000488558 WTAPQ15007 396 aa26.89■■□□□ 1.9
CUL4A-209ENST00000488558 PPP2R5BQ15173 497 aa26.89■■□□□ 1.9
CUL4A-209ENST00000488558 MB21D2Q8IYB1 491 aaPredicted RBP26.89■■□□□ 1.9
CUL4A-209ENST00000488558 SYTL5Q8TDW5 730 aaPredicted RBP26.89■■□□□ 1.9
CUL4A-209ENST00000488558 VAT1LQ9HCJ6 419 aa26.89■■□□□ 1.9
CUL4A-209ENST00000488558 ZBTB5O15062 677 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 PTGS1P23219 599 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 CPT1AP50416 773 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 TROAPQ12815 778 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 TRAF1Q13077 416 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 BMP2KLQ5H9B9 411 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 C9orf50Q5SZB4 431 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 NSUN6Q8TEA1 469 aaKnown RBP26.88■■□□□ 1.89
CUL4A-209ENST00000488558 MTA3Q9BTC8 594 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 POLR3EQ9NVU0 708 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 KIAA1217Q5T5P2 1943 aa26.88■■□□□ 1.89
CUL4A-209ENST00000488558 CD4P01730 458 aa26.87■■□□□ 1.89
CUL4A-209ENST00000488558 ANTXR2P58335 489 aa26.87■■□□□ 1.89
CUL4A-209ENST00000488558 ITGA7Q13683 1181 aa26.87■■□□□ 1.89
CUL4A-209ENST00000488558 FAM109BQ6ICB4 259 aaPredicted RBP26.87■■□□□ 1.89
CUL4A-209ENST00000488558 DEFB123Q8N688 67 aa26.87■■□□□ 1.89
CUL4A-209ENST00000488558 TBC1D5Q92609 795 aa26.87■■□□□ 1.89
CUL4A-209ENST00000488558 IWS1Q96ST2 819 aa26.87■■□□□ 1.89
CUL4A-209ENST00000488558 ESYT1Q9BSJ8 1104 aa26.87■■□□□ 1.89
CUL4A-209ENST00000488558 LSG1Q9H089 658 aaKnown RBP26.87■■□□□ 1.89
CUL4A-209ENST00000488558 MAP3K20Q9NYL2 800 aaKnown RBP26.87■■□□□ 1.89
CUL4A-209ENST00000488558 COL20A1Q9P218 1284 aa26.87■■□□□ 1.89
CUL4A-209ENST00000488558 TMEM67Q5HYA8 995 aa26.86■■□□□ 1.89
CUL4A-209ENST00000488558 MFSD5Q6N075 450 aa26.86■■□□□ 1.89
CUL4A-209ENST00000488558 SAMD3Q8N6K7 520 aa26.86■■□□□ 1.89
CUL4A-209ENST00000488558 RIOX1Q9H6W3 641 aa26.86■■□□□ 1.89
CUL4A-209ENST00000488558 GRIN2DO15399 1336 aa26.86■■□□□ 1.89
CUL4A-209ENST00000488558 HSD17B4P51659 736 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 TTLL4Q14679 1199 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 BRDTQ58F21 947 aaPredicted RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms