RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 KLHDC9Q8NEP7 349 aa16.53■□□□□ 0.24
COL9A2-208ENST00000488463 PIGSQ96S52 555 aa16.53■□□□□ 0.24
COL9A2-208ENST00000488463 UPF3AQ9H1J1 476 aaKnown RBP16.53■□□□□ 0.24
COL9A2-208ENST00000488463 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.52■□□□□ 0.24
COL9A2-208ENST00000488463 DUSP11O75319 330 aaKnown RBP16.52■□□□□ 0.24
COL9A2-208ENST00000488463 CALML3P27482 149 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 NKX3-2P78367 333 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 TMEM63BQ5T3F8 832 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 DHX32Q7L7V1 743 aaKnown RBP16.52■□□□□ 0.24
COL9A2-208ENST00000488463 SYTL5Q8TDW5 730 aaPredicted RBP16.52■□□□□ 0.24
COL9A2-208ENST00000488463 TCEANC2Q96MN5 208 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 SPZ1Q9BXG8 430 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 AMNQ9BXJ7 453 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 SENP6Q9GZR1 1112 aaPredicted RBP16.52■□□□□ 0.24
COL9A2-208ENST00000488463 PDGFCQ9NRA1 345 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 PHF24Q9UPV7 400 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.24
COL9A2-208ENST00000488463 MYADML2A6NDP7 307 aa16.51■□□□□ 0.23
COL9A2-208ENST00000488463 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
COL9A2-208ENST00000488463 EVI5O60447 810 aa16.51■□□□□ 0.23
COL9A2-208ENST00000488463 PTGS1P23219 599 aa16.51■□□□□ 0.23
COL9A2-208ENST00000488463 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
COL9A2-208ENST00000488463 SNX17Q15036 470 aa16.51■□□□□ 0.23
COL9A2-208ENST00000488463 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
COL9A2-208ENST00000488463 NUP133Q8WUM0 1156 aa16.51■□□□□ 0.23
COL9A2-208ENST00000488463 PRO3102Q9H379 93 aa16.51■□□□□ 0.23
COL9A2-208ENST00000488463 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
COL9A2-208ENST00000488463 GNEQ9Y223 722 aaKnown RBP16.51■□□□□ 0.23
COL9A2-208ENST00000488463 MRPL11Q9Y3B7 192 aaKnown RBP16.51■□□□□ 0.23
COL9A2-208ENST00000488463 PNMA6FA0A0J9YX94 578 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 RBM47A0AV96 593 aaKnown RBP16.5■□□□□ 0.23
COL9A2-208ENST00000488463 EPB41L2O43491 1005 aaKnown RBP16.5■□□□□ 0.23
COL9A2-208ENST00000488463 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 RXRAP19793 462 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 CST5P28325 142 aaPredicted RBP16.5■□□□□ 0.23
COL9A2-208ENST00000488463 ADCYAP1R1P41586 468 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 HSD17B4P51659 736 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 GJA9P57773 515 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 KRT32Q14532 448 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 FBXO16Q8IX29 292 aaPredicted RBP16.5■□□□□ 0.23
COL9A2-208ENST00000488463 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
COL9A2-208ENST00000488463 VTA1Q9NP79 307 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 NR2E3Q9Y5X4 410 aa16.5■□□□□ 0.23
COL9A2-208ENST00000488463 KIAA1217Q5T5P2 1943 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 KBTBD13C9JR72 458 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 REC8O95072 547 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 CPA1P15085 419 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 SMPD1P17405 629 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 APOA5Q6Q788 366 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 EEPD1Q7L9B9 569 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 RNF180Q86T96 592 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 HOMER1Q86YM7 354 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 TAAR1Q96RJ0 339 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 TSEN34Q9BSV6 310 aaKnown RBP16.49■□□□□ 0.23
COL9A2-208ENST00000488463 USP26Q9BXU7 913 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 PCDHA1Q9Y5I3 950 aa16.49■□□□□ 0.23
COL9A2-208ENST00000488463 KIF5BP33176 963 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 ATN1P54259 1190 aaPredicted RBP16.48■□□□□ 0.23
COL9A2-208ENST00000488463 TNFAIP2Q03169 654 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 FUT2Q10981 343 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 C1orf53Q5VUE5 145 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 SLC39A5Q6ZMH5 540 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 MCF2L2Q86YR7 1114 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 C7orf61Q8IZ16 206 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 CMTR1Q8N1G2 835 aaKnown RBP16.48■□□□□ 0.23
COL9A2-208ENST00000488463 FANCBQ8NB91 859 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 CTCFLQ8NI51 663 aaPredicted RBP16.48■□□□□ 0.23
COL9A2-208ENST00000488463 FERMT2Q96AC1 680 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 LZTS2Q9BRK4 669 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 SLC12A7Q9Y666 1083 aa16.48■□□□□ 0.23
COL9A2-208ENST00000488463 A0A1W2PQ45 241 aaPredicted RBP16.47■□□□□ 0.23
COL9A2-208ENST00000488463 A0A1W2PQY0 241 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 CALM1P0DP23 149 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 CALM2P0DP24 149 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 CALM3P0DP25 149 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 ACLYP53396 1101 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 KCNA10Q16322 511 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 IQSEC1Q6DN90 963 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 TMTC3Q6ZXV5 915 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 AGXT2Q9BYV1 514 aa16.47■□□□□ 0.23
COL9A2-208ENST00000488463 FAM217BQ9NTX9 383 aaPredicted RBP16.47■□□□□ 0.23
COL9A2-208ENST00000488463 CFBP00751 764 aa16.46■□□□□ 0.23
COL9A2-208ENST00000488463 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
COL9A2-208ENST00000488463 HMGB1P09429 215 aaKnown RBP16.46■□□□□ 0.23
COL9A2-208ENST00000488463 GNAQP50148 359 aa16.46■□□□□ 0.23
COL9A2-208ENST00000488463 RTP1P59025 263 aa16.46■□□□□ 0.23
COL9A2-208ENST00000488463 DUSP28Q4G0W2 176 aa16.46■□□□□ 0.23
COL9A2-208ENST00000488463 MICU3Q86XE3 530 aa16.46■□□□□ 0.23
COL9A2-208ENST00000488463 SAMD3Q8N6K7 520 aa16.46■□□□□ 0.23
COL9A2-208ENST00000488463 NSUN6Q8TEA1 469 aaKnown RBP16.46■□□□□ 0.23
COL9A2-208ENST00000488463 JAKMIP1Q96N16 626 aaKnown RBP16.46■□□□□ 0.23
COL9A2-208ENST00000488463 RMDN3Q96TC7 470 aa16.46■□□□□ 0.23
COL9A2-208ENST00000488463 MAP3K20Q9NYL2 800 aaKnown RBP16.46■□□□□ 0.23
COL9A2-208ENST00000488463 ZMYND8Q9ULU4 1186 aaPredicted RBP16.46■□□□□ 0.23
COL9A2-208ENST00000488463 Q9Y3F1 56 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms