RNA–Protein interactions for RNA: ENST00000488410.5

TM2D1-209, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-209ENST00000488410 Q9Y3F1 56 aa11.52□□□□□ -0.57
TM2D1-209ENST00000488410 DDX49Q9Y6V7 483 aaKnown RBP11.52□□□□□ -0.57
TM2D1-209ENST00000488410 MYH6P13533 1939 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 TMEM265A0A087WTH1 108 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 GRXCR1A8MXD5 290 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 ZNF213O14771 459 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 HSPD1P10809 573 aaKnown RBP11.51□□□□□ -0.57
TM2D1-209ENST00000488410 CCL23P55773 120 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 PSMC6P62333 389 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 NMIQ13287 307 aaPredicted RBP11.51□□□□□ -0.57
TM2D1-209ENST00000488410 HDAC1Q13547 482 aaPredicted RBP11.51□□□□□ -0.57
TM2D1-209ENST00000488410 GRIN2CQ14957 1233 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 TTC14Q96N46 770 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 GAS2L1Q99501 681 aaPredicted RBP11.51□□□□□ -0.57
TM2D1-209ENST00000488410 KATNBL1Q9H079 304 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 TRPV6Q9H1D0 765 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
TM2D1-209ENST00000488410 RNF41Q9H4P4 317 aaPredicted RBP11.51□□□□□ -0.57
TM2D1-209ENST00000488410 IL23AQ9NPF7 189 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
TM2D1-209ENST00000488410 GNEQ9Y223 722 aaKnown RBP11.51□□□□□ -0.57
TM2D1-209ENST00000488410 A0A0D9SFI3 127 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 DHX16O60231 1041 aaKnown RBP11.5□□□□□ -0.57
TM2D1-209ENST00000488410 PCP11498 1178 aaKnown RBP11.5□□□□□ -0.57
TM2D1-209ENST00000488410 CPT1AP50416 773 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 ALDH5A1P51649 535 aaPredicted RBP11.5□□□□□ -0.57
TM2D1-209ENST00000488410 NUBP1P53384 320 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 FAM47CQ5HY64 1035 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 AKNAD1Q5T1N1 836 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 TAPT1Q6NXT6 567 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 C16orf59Q7L2K0 433 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 RASGRP2Q7LDG7 609 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 OTOP2Q7RTS6 562 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 OR6J1Q8NGC5 347 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 ESR2Q92731 530 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 YTHDC1Q96MU7 727 aaKnown RBP11.5□□□□□ -0.57
TM2D1-209ENST00000488410 ZKSCAN3Q9BRR0 538 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 TCP11L1Q9NUJ3 509 aa11.5□□□□□ -0.57
TM2D1-209ENST00000488410 ZBBXA8MT70 800 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 NFIBO00712 420 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 CTAGE5O15320 804 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 FOXP2O15409 715 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 CD4P01730 458 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 FGRP09769 529 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 SUPT20HL2P0C7V6 817 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 SDSP20132 328 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 IGFBP4P22692 258 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 PTGS1P23219 599 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 NKX3-2P78367 333 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 RAB30Q15771 203 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 USH1GQ495M9 461 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 DUSP28Q4G0W2 176 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 BTNL9Q6UXG8 535 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 IQCA1Q86XH1 822 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 TICAM2Q86XR7 235 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 RETREG2Q8NC44 543 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 SYMPKQ92797 1274 aaKnown RBP11.49□□□□□ -0.57
TM2D1-209ENST00000488410 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 VAT1LQ9HCJ6 419 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 ASTN1O14525 1302 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 CCDC171Q6TFL3 1326 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 RAD50Q92878 1312 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
TM2D1-209ENST00000488410 LAMA2P24043 3122 aaKnown RBP11.48□□□□□ -0.57
TM2D1-209ENST00000488410 B4GALT4O60513 344 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 KPNA6O60684 536 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 GOLGA8HP0CJ92 632 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 PDHBP11177 359 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 PBX2P40425 430 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 TMEM63BQ5T3F8 832 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 CWC27Q6UX04 472 aaKnown RBP11.48□□□□□ -0.57
TM2D1-209ENST00000488410 HERVK_113Q902F9 699 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 MTG1Q9BT17 334 aaPredicted RBP11.48□□□□□ -0.57
TM2D1-209ENST00000488410 PBX4Q9BYU1 374 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 UBA5Q9GZZ9 404 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 KAT14Q9H8E8 782 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 NOD1Q9Y239 953 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 SLC4A7Q9Y6M7 1214 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 SALL3Q9BXA9 1300 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 MYH7BA7E2Y1 1941 aa11.48□□□□□ -0.57
TM2D1-209ENST00000488410 TRIP12Q14669 1992 aaPredicted RBP11.47□□□□□ -0.57
TM2D1-209ENST00000488410 GBF1Q92538 1859 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 LOC102724159A0A0B4J2E5 919 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 HIP1O00291 1037 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 TXNP10599 105 aaKnown RBP11.47□□□□□ -0.57
TM2D1-209ENST00000488410 NOVP48745 357 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 RPS6P62753 249 aaKnown RBP11.47□□□□□ -0.57
TM2D1-209ENST00000488410 ZNF543Q08ER8 600 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 AAMPQ13685 434 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 PPP2R5BQ15173 497 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 PWP2Q15269 919 aaKnown RBP11.47□□□□□ -0.57
TM2D1-209ENST00000488410 CCDC85BQ15834 202 aaPredicted RBP11.47□□□□□ -0.57
TM2D1-209ENST00000488410 GPATCH4Q5T3I0 446 aaKnown RBP11.47□□□□□ -0.57
TM2D1-209ENST00000488410 SLC30A10Q6XR72 485 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 DEFB128Q7Z7B8 93 aa11.47□□□□□ -0.57
TM2D1-209ENST00000488410 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms