RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
VAMP7-206ENST00000488344 EPHB4P54760 987 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 SNAP25P60880 206 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 HAND2P61296 217 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 BEX3Q00994 111 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 ZNF543Q08ER8 600 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 ITGA7Q13683 1181 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 BAATQ14032 418 aaPredicted RBP13.19□□□□□ -0.3
VAMP7-206ENST00000488344 CXCL17Q6UXB2 119 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 KIAA1211Q6ZU35 1233 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 ZNF589Q86UQ0 364 aaPredicted RBP13.19□□□□□ -0.3
VAMP7-206ENST00000488344 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
VAMP7-206ENST00000488344 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 DNERQ8NFT8 737 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 MAFAQ8NHW3 353 aaPredicted RBP13.19□□□□□ -0.3
VAMP7-206ENST00000488344 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 GPCPD1Q9NPB8 672 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 POLR3EQ9NVU0 708 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 FRMPD2Q68DX3 1309 aaPredicted RBP13.18□□□□□ -0.3
VAMP7-206ENST00000488344 ZNFX1Q9P2E3 1918 aaKnown RBP13.18□□□□□ -0.3
VAMP7-206ENST00000488344 POTEMA6NI47 508 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 NKRFO15226 690 aaKnown RBP eCLIP13.18□□□□□ -0.3
VAMP7-206ENST00000488344 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 FOSL2P15408 326 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 DNAJB2P25686 324 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 CPT1AP50416 773 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 DUSP28Q4G0W2 176 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 TTBK2Q6IQ55 1244 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 TAPT1Q6NXT6 567 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 PPP1R12CQ9BZL4 782 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 HIPK3Q9H422 1215 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
VAMP7-206ENST00000488344 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
VAMP7-206ENST00000488344 ASTN1O14525 1302 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 NFIBO00712 420 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 CD4P01730 458 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 CSF2RAP15509 400 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 CALML3P27482 149 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
VAMP7-206ENST00000488344 NUCB1Q02818 461 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 PDE4DQ08499 809 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 EEPD1Q7L9B9 569 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 TBC1D10CQ8IV04 446 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 SCFD2Q8WU76 684 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.34e-7■□□□□ 8.7
VAMP7-206ENST00000488344 WDR11Q9BZH6 1224 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
VAMP7-206ENST00000488344 KAT14Q9H8E8 782 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 IL23AQ9NPF7 189 aa13.17□□□□□ -0.3
VAMP7-206ENST00000488344 KPNA6O60684 536 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 RAB30Q15771 203 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
VAMP7-206ENST00000488344 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 PLEKHM2Q8IWE5 1019 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 RPUSD2Q8IZ73 545 aaKnown RBP13.16□□□□□ -0.3
VAMP7-206ENST00000488344 PNMA1Q8ND90 353 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 MYLIPQ8WY64 445 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 DSCC1Q9BVC3 393 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 KRT23Q9C075 422 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 PDGFCQ9NRA1 345 aa13.16□□□□□ -0.3
VAMP7-206ENST00000488344 COL6A3P12111 3177 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
VAMP7-206ENST00000488344 FGBP02675 491 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 PFKMP08237 780 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
VAMP7-206ENST00000488344 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 CWC27Q6UX04 472 aaKnown RBP13.15□□□□□ -0.3
VAMP7-206ENST00000488344 SLC30A10Q6XR72 485 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 MCF2L2Q86YR7 1114 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 OR6J1Q8NGC5 347 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 HERVK_113Q902F9 699 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 ZNF576Q9H609 170 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 SMCHD1A6NHR9 2005 aa13.15□□□□□ -0.3
VAMP7-206ENST00000488344 ABCB11O95342 1321 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 NEDD4P46934 1319 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 KDM4AO75164 1064 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 EDNRBP24530 442 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 CYP2C18P33260 490 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 RASIP1Q5U651 963 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 ZNF365Q70YC5 407 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 ANKS1AQ92625 1134 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 ZSCAN10Q96SZ4 725 aaPredicted RBP13.14□□□□□ -0.31
VAMP7-206ENST00000488344 GAS2L1Q99501 681 aaPredicted RBP13.14□□□□□ -0.31
VAMP7-206ENST00000488344 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
VAMP7-206ENST00000488344 MTG1Q9BT17 334 aaPredicted RBP13.14□□□□□ -0.31
VAMP7-206ENST00000488344 ALDH8A1Q9H2A2 487 aaPredicted RBP13.14□□□□□ -0.31
VAMP7-206ENST00000488344 DHX16O60231 1041 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms