RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 NTRK3Q16288 839 aa18.13■□□□□ 0.49
C9orf3-219ENST00000488186 ZNF792Q3KQV3 632 aa18.13■□□□□ 0.49
C9orf3-219ENST00000488186 SAMD3Q8N6K7 520 aa18.13■□□□□ 0.49
C9orf3-219ENST00000488186 ZNF713Q8N859 430 aaPredicted RBP18.13■□□□□ 0.49
C9orf3-219ENST00000488186 SH3TC2Q8TF17 1288 aa18.13■□□□□ 0.49
C9orf3-219ENST00000488186 CCDC12Q8WUD4 166 aaPredicted RBP18.13■□□□□ 0.49
C9orf3-219ENST00000488186 GPKOWQ92917 476 aaPredicted RBP eCLIP18.13■□□□□ 0.49
C9orf3-219ENST00000488186 GTF3C6Q969F1 213 aa18.13■□□□□ 0.49
C9orf3-219ENST00000488186 MPHOSPH6Q99547 160 aaKnown RBP18.13■□□□□ 0.49
C9orf3-219ENST00000488186 ADD3Q9UEY8 706 aaKnown RBP18.13■□□□□ 0.49
C9orf3-219ENST00000488186 B4DLN1 442 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 LARGE1O95461 756 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 IGHA2P01877 340 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 HMGCRP04035 888 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 SCG2P13521 617 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 RGS19P49795 217 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 MRPL12P52815 198 aaKnown RBP18.12■□□□□ 0.49
C9orf3-219ENST00000488186 RPS6P62753 249 aaKnown RBP18.12■□□□□ 0.49
C9orf3-219ENST00000488186 CNTN2Q02246 1040 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 CCL14Q16627 93 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 PFKFB3Q16875 520 aaPredicted RBP18.12■□□□□ 0.49
C9orf3-219ENST00000488186 MAML3Q96JK9 1138 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 PSTPIP2Q9H939 334 aa18.12■□□□□ 0.49
C9orf3-219ENST00000488186 MAP3K20Q9NYL2 800 aaKnown RBP18.12■□□□□ 0.49
C9orf3-219ENST00000488186 DNAJC25-GNG10A0A024R161 153 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 ASB14A6NK59 587 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 CCDC85CA6NKD9 419 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 DEXIO95424 95 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 OLFML2BQ68BL8 750 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 WWC2Q6AWC2 1192 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 SLC30A10Q6XR72 485 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 CCDC83Q8IWF9 413 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 WASF1Q92558 559 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 TBC1D5Q92609 795 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 BARHL2Q9NY43 387 aa18.11■□□□□ 0.49
C9orf3-219ENST00000488186 MYCP01106 439 aaPredicted RBP18.1■□□□□ 0.49
C9orf3-219ENST00000488186 INHAP05111 366 aa18.1■□□□□ 0.49
C9orf3-219ENST00000488186 XBP1P17861 261 aa18.1■□□□□ 0.49
C9orf3-219ENST00000488186 PPP1R18Q6NYC8 613 aa18.1■□□□□ 0.49
C9orf3-219ENST00000488186 FCHSD1Q86WN1 690 aa18.1■□□□□ 0.49
C9orf3-219ENST00000488186 FAM133AQ8N9E0 248 aa18.1■□□□□ 0.49
C9orf3-219ENST00000488186 TRIB2Q92519 343 aa18.1■□□□□ 0.49
C9orf3-219ENST00000488186 GLT8D2Q9H1C3 349 aa18.1■□□□□ 0.49
C9orf3-219ENST00000488186 ORC3Q9UBD5 711 aaPredicted RBP18.1■□□□□ 0.49
C9orf3-219ENST00000488186 SMCO2A6NFE2 343 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 STXBP3O00186 592 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 HOXA13P31271 388 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-219ENST00000488186 MAP3K21Q5TCX8 1036 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 ARHGEF16Q5VV41 709 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 ZNF467Q7Z7K2 595 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-219ENST00000488186 MSL3Q8N5Y2 521 aaKnown RBP18.09■□□□□ 0.49
C9orf3-219ENST00000488186 CCDC148Q8NFR7 591 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 TINF2Q9BSI4 451 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 C6orf50Q9HD87 102 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 SMCHD1A6NHR9 2005 aa18.09■□□□□ 0.49
C9orf3-219ENST00000488186 PLXNA1Q9UIW2 1896 aa18.08■□□□□ 0.49
C9orf3-219ENST00000488186 SOWAHBA6NEL2 793 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 CNGA1P29973 690 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 CYP2C19P33261 490 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 HSD17B4P51659 736 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 ADCY7P51828 1080 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 PKN1Q16512 942 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 DNERQ8NFT8 737 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 SYTL5Q8TDW5 730 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-219ENST00000488186 NSUN6Q8TEA1 469 aaKnown RBP18.08■□□□□ 0.48
C9orf3-219ENST00000488186 PURBQ96QR8 312 aaKnown RBP18.08■□□□□ 0.48
C9orf3-219ENST00000488186 TAAR1Q96RJ0 339 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 RMDN3Q96TC7 470 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 LLPHQ9BRT6 129 aaKnown RBP18.08■□□□□ 0.48
C9orf3-219ENST00000488186 TMEM106CQ9BVX2 250 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 HMX1Q9NP08 348 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-219ENST00000488186 BRCA2P51587 3418 aa18.08■□□□□ 0.48
C9orf3-219ENST00000488186 GJB1P08034 283 aa18.07■□□□□ 0.48
C9orf3-219ENST00000488186 PRKAR2AP13861 404 aaKnown RBP18.07■□□□□ 0.48
C9orf3-219ENST00000488186 GNA11P29992 359 aa18.07■□□□□ 0.48
C9orf3-219ENST00000488186 ALDH5A1P51649 535 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-219ENST00000488186 NLRP5P59047 1200 aa18.07■□□□□ 0.48
C9orf3-219ENST00000488186 PDE4DQ08499 809 aa18.07■□□□□ 0.48
C9orf3-219ENST00000488186 FAM184AQ8NB25 1140 aa18.07■□□□□ 0.48
C9orf3-219ENST00000488186 TMX3Q96JJ7 454 aa18.07■□□□□ 0.48
C9orf3-219ENST00000488186 SH3GLB2Q9NR46 395 aa18.07■□□□□ 0.48
C9orf3-219ENST00000488186 RPTORQ8N122 1335 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 SYNGAP1Q96PV0 1343 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 STK36Q9NRP7 1315 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 SPDYE3A6NKU9 549 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 OPLAHO14841 1288 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 CD2BP2O95400 341 aaKnown RBP18.06■□□□□ 0.48
C9orf3-219ENST00000488186 CTDNEP1O95476 244 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 CACNB2Q08289 660 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-219ENST00000488186 TRIM32Q13049 653 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 TRIM29Q14134 588 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 USP17L6PQ6QN14 398 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 MAMDC4Q6UXC1 1216 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 ARMCX2Q7L311 632 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 NSUN7Q8NE18 718 aaKnown RBP18.06■□□□□ 0.48
C9orf3-219ENST00000488186 BICD2Q8TD16 824 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 ALG1Q9BT22 464 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms