RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 COL6A3P12111 3177 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 KAT6AQ92794 2004 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 ELP1O95163 1332 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 A0A0U1RQG5 324 aaPredicted RBP13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 KIAA0355O15063 1070 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 EPHB4P54760 987 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 IFIT1BQ5T764 474 aaKnown RBP13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 IQSEC1Q6DN90 963 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 CYB5R4Q7L1T6 521 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 ADGRF4Q8IZF3 695 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 CNNM2Q9H8M5 875 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 VTA1Q9NP79 307 aa13.22□□□□□ -0.29
NIPAL3-207ENST00000488155 SCN10AQ9Y5Y9 1956 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 TET1Q8NFU7 2136 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 WDR19Q8NEZ3 1342 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 ARVCFO00192 962 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 CYP21A2P08686 494 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 PARP1P09874 1014 aaKnown RBP13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 PDE4DQ08499 809 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 QRICH1Q2TAL8 776 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 ANKS1AQ92625 1134 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 WDR11Q9BZH6 1224 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 PPP1R12CQ9BZL4 782 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 TAF6LQ9Y6J9 622 aa13.21□□□□□ -0.29
NIPAL3-207ENST00000488155 RAD50Q92878 1312 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 CDK7P50613 346 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 PSMC6P62333 389 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 FPGSQ05932 587 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 TRDNQ13061 729 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 SEC23AQ15436 765 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 ASPRV1Q53RT3 343 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 SKAP1Q86WV1 359 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 MORC4Q8TE76 937 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 COPS5Q92905 334 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 MTMR10Q9NXD2 777 aa13.2□□□□□ -0.3
NIPAL3-207ENST00000488155 MROH7Q68CQ1 1323 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 ZEB2O60315 1214 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 TIMP1P01033 207 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 ITGA7Q13683 1181 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 DUSP28Q4G0W2 176 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 FAM126BQ8IXS8 530 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 JMJD4Q9H9V9 463 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 TBX21Q9UL17 535 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 PNMA2Q9UL42 364 aa13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
NIPAL3-207ENST00000488155 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 ABCB11O95342 1321 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 E7EWF7 191 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 IFIT3O14879 490 aaKnown RBP13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 SGSM2O43147 1006 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 MYL3P08590 195 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 ACRP10323 421 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 CYP2C18P33260 490 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 NT5C2P49902 561 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 NKX3-2P78367 333 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 STOX1Q6ZVD7 989 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 FBXO11Q86XK2 927 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 MPHOSPH6Q99547 160 aaKnown RBP13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
NIPAL3-207ENST00000488155 KLRF2D3W0D1 207 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 CFBP00751 764 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 CHMP4BP1P59074 171 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 ZNF697Q5TEC3 545 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 SEPT14Q6ZU15 432 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 HOMER1Q86YM7 354 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 SLC17A8Q8NDX2 589 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 DNERQ8NFT8 737 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 NCOA7Q8NI08 942 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 TRPV6Q9H1D0 765 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 Q9Y3F1 56 aa13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-207ENST00000488155 UMODL1Q5DID0 1318 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 ERICH2A1L162 156 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 B4DLN1 442 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 CABYRO75952 493 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 ARIH2O95376 493 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 CD4P01730 458 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 TXNP10599 105 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 CSF2RAP15509 400 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 EIF2AK2P19525 551 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 EDNRBP24530 442 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms