RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, human

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF38-208	ENST00000488058	KCNA10	Q16322	511 aa		27.57	■■■□□ 2
RNF38-208	ENST00000488058	MCF2L2	Q86YR7	1114 aa		27.57	■■■□□ 2
RNF38-208	ENST00000488058	KLHDC9	Q8NEP7	349 aa		27.57	■■■□□ 2
RNF38-208	ENST00000488058	MORC4	Q8TE76	937 aa		27.57	■■■□□ 2
RNF38-208	ENST00000488058	TSEN34	Q9BSV6	310 aa	Known RBP	27.57	■■■□□ 2
RNF38-208	ENST00000488058	LRRC2	Q9BYS8	371 aa		27.57	■■■□□ 2
RNF38-208	ENST00000488058	SH2B2	O14492	632 aa	Predicted RBP	27.56	■■■□□ 2
RNF38-208	ENST00000488058	ZBTB5	O15062	677 aa		27.56	■■■□□ 2
RNF38-208	ENST00000488058	SLC34A2	O95436	690 aa		27.56	■■■□□ 2
RNF38-208	ENST00000488058	GJA9	P57773	515 aa		27.56	■■■□□ 2
RNF38-208	ENST00000488058	TAPT1	Q6NXT6	567 aa		27.56	■■■□□ 2
RNF38-208	ENST00000488058	RGS22	Q8NE09	1264 aa		27.56	■■■□□ 2
RNF38-208	ENST00000488058	CTCFL	Q8NI51	663 aa	Predicted RBP	27.56	■■■□□ 2
RNF38-208	ENST00000488058	PIBF1	Q8WXW3	757 aa		27.56	■■■□□ 2
RNF38-208	ENST00000488058	PIGS	Q96S52	555 aa		27.56	■■■□□ 2
RNF38-208	ENST00000488058	MTA3	Q9BTC8	594 aa		27.56	■■■□□ 2
RNF38-208	ENST00000488058	UPF3A	Q9H1J1	476 aa	Known RBP	27.56	■■■□□ 2
RNF38-208	ENST00000488058	LOC102724159	A0A0B4J2E5	919 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	DDAH1	O94760	285 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	SMPD1	P17405	629 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	PTGS1	P23219	599 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	PWP2	Q15269	919 aa	Known RBP	27.55	■■■□□ 2
RNF38-208	ENST00000488058	SLC35G1	Q2M3R5	365 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	GNAS	Q5JWF2	1037 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	IQSEC1	Q6DN90	963 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	TLK2	Q86UE8	772 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	DNER	Q8NFT8	737 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	MTMR8	Q96EF0	704 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	AP5M1	Q9H0R1	490 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	STARD7	Q9NQZ5	370 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	PRKAG2	Q9UGJ0	569 aa		27.55	■■■□□ 2
RNF38-208	ENST00000488058	MOXD2P	A6NHM9	499 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058		B4DLN1	442 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058	PPP1R11	O60927	126 aa	Predicted RBP	27.54	■■■□□ 2
RNF38-208	ENST00000488058	CFB	P00751	764 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058	MAGEA10	P43363	369 aa	Predicted RBP	27.54	■■■□□ 2
RNF38-208	ENST00000488058	MRPL12	P52815	198 aa	Known RBP	27.54	■■■□□ 2
RNF38-208	ENST00000488058	BEX3	Q00994	111 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058	TMTC2	Q8N394	836 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058	PCSK9	Q8NBP7	692 aa	Known RBP	27.54	■■■□□ 2
RNF38-208	ENST00000488058	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.54	■■■□□ 2
RNF38-208	ENST00000488058	NEK1	Q96PY6	1258 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058	RIOX1	Q9H6W3	641 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058	PRDM5	Q9NQX1	630 aa	Predicted RBP	27.54	■■■□□ 2
RNF38-208	ENST00000488058	PPP4R2	Q9NY27	417 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.54	■■■□□ 2
RNF38-208	ENST00000488058	PCDHA1	Q9Y5I3	950 aa		27.54	■■■□□ 2
RNF38-208	ENST00000488058	DYNC1LI2	O43237	492 aa	Predicted RBP	27.53	■■■□□ 2
RNF38-208	ENST00000488058	CYTH3	O43739	400 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	ASGR1	P07306	291 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	CST5	P28325	142 aa	Predicted RBP	27.53	■■■□□ 2
RNF38-208	ENST00000488058	KIF5B	P33176	963 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	SNX17	Q15036	470 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	TMEM63B	Q5T3F8	832 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	CCSAP	Q6IQ19	270 aa	Predicted RBP	27.53	■■■□□ 2
RNF38-208	ENST00000488058	RAB11FIP4	Q86YS3	637 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	VTI1A	Q96AJ9	217 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	TAAR1	Q96RJ0	339 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	PRO3102	Q9H379	93 aa		27.53	■■■□□ 2
RNF38-208	ENST00000488058	GNE	Q9Y223	722 aa	Known RBP	27.53	■■■□□ 2
RNF38-208	ENST00000488058	RXRA	P19793	462 aa		27.52	■■■□□ 2
RNF38-208	ENST00000488058	MDM2	Q00987	491 aa	Predicted RBP	27.52	■■■□□ 2
RNF38-208	ENST00000488058	GLT1D1	Q96MS3	346 aa		27.52	■■■□□ 2
RNF38-208	ENST00000488058	GDF15	Q99988	308 aa		27.52	■■■□□ 2
RNF38-208	ENST00000488058	COL20A1	Q9P218	1284 aa		27.52	■■■□□ 2
RNF38-208	ENST00000488058	RASEF	Q8IZ41	740 aa		27.51	■■□□□ 1.99
RNF38-208	ENST00000488058	WDR11	Q9BZH6	1224 aa		27.51	■■□□□ 1.99
RNF38-208	ENST00000488058	PQBP1	O60828	265 aa	Known RBP	27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	EDNRB	P24530	442 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	LIFR	P42702	1097 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	TLE2	Q04725	743 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	C1orf53	Q5VUE5	145 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	TCEANC2	Q96MN5	208 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	RMDN3	Q96TC7	470 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	MAP3K14	Q99558	947 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	LBHD1	Q9BQE6	289 aa	Predicted RBP	27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	MAF1	Q9H063	256 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	SLC12A7	Q9Y666	1083 aa		27.5	■■□□□ 1.99
RNF38-208	ENST00000488058	PNMA6F	A0A0J9YX94	578 aa		27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	CTAGE5	O15320	804 aa		27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	TRAF1	Q13077	416 aa		27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	KRT32	Q14532	448 aa		27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	FSCN1	Q16658	493 aa	Known RBP	27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	ADCK5	Q3MIX3	580 aa		27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	ARHGEF16	Q5VV41	709 aa		27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	NSUN6	Q8TEA1	469 aa	Known RBP	27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	UBE2O	Q9C0C9	1292 aa	Known RBP	27.49	■■□□□ 1.99
RNF38-208	ENST00000488058	OPLAH	O14841	1288 aa		27.48	■■□□□ 1.99
RNF38-208	ENST00000488058	CALM1	P0DP23	149 aa		27.48	■■□□□ 1.99
RNF38-208	ENST00000488058	CALM2	P0DP24	149 aa		27.48	■■□□□ 1.99
RNF38-208	ENST00000488058	CALM3	P0DP25	149 aa		27.48	■■□□□ 1.99
RNF38-208	ENST00000488058	EIF2AK2	P19525	551 aa	Known RBP	27.48	■■□□□ 1.99
RNF38-208	ENST00000488058	DUSP28	Q4G0W2	176 aa		27.48	■■□□□ 1.99
RNF38-208	ENST00000488058	ZEB2	O60315	1214 aa		27.47	■■□□□ 1.99
RNF38-208	ENST00000488058	PLEKHA8P1	O95397	391 aa		27.47	■■□□□ 1.99
RNF38-208	ENST00000488058	HOXA13	P31271	388 aa	Predicted RBP	27.47	■■□□□ 1.99
RNF38-208	ENST00000488058	GNAQ	P50148	359 aa		27.47	■■□□□ 1.99
RNF38-208	ENST00000488058	FXR1	P51114	621 aa	Known RBP eCLIP	27.47	■■□□□ 1.99
RNF38-208	ENST00000488058	PPP2R5B	Q15173	497 aa		27.47	■■□□□ 1.99
RNF38-208	ENST00000488058	ERICH6B	Q5W0A0	696 aa		27.47	■■□□□ 1.99

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