RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PRR13Q9NZ81 148 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 UBP1Q9NZI7 540 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 PCDHGB7Q9Y5F8 929 aa5.9□□□□□ -1.46
HMGB1P36-201ENST00000487709 C9IYK1 514 aa5.89□□□□□ -1.47
HMGB1P36-201ENST00000487709 SHOXO15266 292 aa5.89□□□□□ -1.47
HMGB1P36-201ENST00000487709 GREM1O60565 184 aa5.89□□□□□ -1.47
HMGB1P36-201ENST00000487709 TDRD10Q5VZ19 366 aaKnown RBP5.89□□□□□ -1.47
HMGB1P36-201ENST00000487709 C7orf61Q8IZ16 206 aa5.89□□□□□ -1.47
HMGB1P36-201ENST00000487709 SLC16A11Q8NCK7 471 aa5.89□□□□□ -1.47
HMGB1P36-201ENST00000487709 ZNF296Q8WUU4 475 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P36-201ENST00000487709 SRRDQ9UH36 339 aa5.89□□□□□ -1.47
HMGB1P36-201ENST00000487709 TNFRSF10CO14798 259 aa5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 FGF10O15520 208 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 PMLP29590 882 aa5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 APOBRQ0VD83 1088 aa5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 COL9A2Q14055 689 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 B3GNT8Q7Z7M8 397 aa5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 BRF1Q92994 677 aa5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 GPRASP2Q96D09 838 aa5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 LOXL4Q96JB6 756 aa5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 SUCOQ9UBS9 1254 aaKnown RBP5.88□□□□□ -1.47
HMGB1P36-201ENST00000487709 MEIS3P2A8K0S8 358 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 LRRFIP1Q32MZ4 808 aaKnown RBP5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 NAALADL2Q58DX5 795 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 NOL9Q5SY16 702 aaKnown RBP5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 DCAF15Q66K64 600 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 CPZQ66K79 652 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 SMARCC2Q8TAQ2 1214 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 C8orf49Q96NF6 230 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 NOX5Q96PH1 765 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 FAM86C1Q9NVL1 165 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 NTMQ9P121 344 aa5.87□□□□□ -1.47
HMGB1P36-201ENST00000487709 IFNGR1P15260 489 aa5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 SARSP49591 514 aaKnown RBP5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 ZNF165P49910 485 aa5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 ZNF761Q86XN6 746 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 REXO1Q8N1G1 1221 aaKnown RBP5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 DHRS1Q96LJ7 313 aa5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 PTCHD1Q96NR3 888 aa5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 RBM15Q96T37 977 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 NT5C1AQ9BXI3 368 aa5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 ACBD3Q9H3P7 528 aa5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 ADAMTS1Q9UHI8 967 aa5.86□□□□□ -1.47
HMGB1P36-201ENST00000487709 CD3EP07766 207 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 ZNF20P17024 532 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 L1CAMP32004 1257 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 CORO7P57737 925 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 ZNF445P59923 1031 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 ARID5AQ03989 594 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 PAK2Q13177 524 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 SREK1Q8WXA9 508 aaKnown RBP5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 ZBTB8AQ96BR9 441 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 FCRL3Q96P31 734 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 SRRTQ9BXP5 876 aaKnown RBP5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 KRTAP3-1Q9BYR8 98 aa5.85□□□□□ -1.47
HMGB1P36-201ENST00000487709 TBC1D8O95759 1140 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 GLI4P10075 376 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 ACRP10323 421 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 NOP2P46087 812 aaKnown RBP5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 RACK1P63244 317 aaKnown RBP5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 SMAD4Q13485 552 aaKnown RBP5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 CABP7Q86V35 215 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 PPFIBP1Q86W92 1011 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 FIBCD1Q8N539 461 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 SLC43A3Q8NBI5 491 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 NKD1Q969G9 470 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 SCAND2PQ9GZW5 306 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 GP6Q9HCN6 339 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 SPATA6Q9NWH7 488 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 STRIP2Q9ULQ0 834 aa5.84□□□□□ -1.47
HMGB1P36-201ENST00000487709 TP53P04637 393 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 IMPDH2P12268 514 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 DNAJA1P31689 397 aaKnown RBP5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 GJA8P48165 433 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 PMS1P54277 932 aaKnown RBP5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 AXDND1Q5T1B0 1012 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 TTLL7Q6ZT98 887 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 ADAMTS17Q8TE56 1095 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 CPLX3Q8WVH0 158 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 TSPAN17Q96FV3 270 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 SEC16BQ96JE7 1060 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 ZDHHC15Q96MV8 337 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 TANGO6Q9C0B7 1094 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 NOL6Q9H6R4 1146 aaKnown RBP5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 FBLN5Q9UBX5 448 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 RWDD3Q9Y3V2 267 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 FHOD1Q9Y613 1164 aa5.83□□□□□ -1.48
HMGB1P36-201ENST00000487709 PLATP00750 562 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 SSBP05455 408 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 C6P13671 934 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 TBC1D10BQ4KMP7 808 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 CHST13Q8NET6 341 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 RASGRP4Q8TDF6 673 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 DDX11Q96FC9 970 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 SAMD11Q96NU1 681 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 FERD3LQ96RJ6 166 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 CRBNQ96SW2 442 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 TINF2Q9BSI4 451 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms