RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 PRKRIP1Q9H875 184 aaPredicted RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 SPC25Q9HBM1 224 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 TLR7Q9NYK1 1049 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 ASPMQ8IZT6 3477 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 LOC730098B7Z3J9 87 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 KDM4AO75164 1064 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 CHGBP05060 677 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 MYL3P08590 195 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 PLCG2P16885 1265 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 RBM10P98175 930 aaKnown RBP7.14□□□□□ -1.27
COL4A3-206ENST00000487633 ICA1Q05084 483 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 GPM6BQ13491 265 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 CAMK1Q14012 370 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 PUS10Q3MIT2 529 aaKnown RBP7.14□□□□□ -1.27
COL4A3-206ENST00000487633 ZNF467Q7Z7K2 595 aaPredicted RBP7.14□□□□□ -1.27
COL4A3-206ENST00000487633 MAGEB6Q8N7X4 407 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 SSH1Q8WYL5 1049 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 COPS5Q92905 334 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 IGFLR1Q9H665 355 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 PLXNA4Q9HCM2 1894 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 CLEC1BQ9P126 229 aa7.14□□□□□ -1.27
COL4A3-206ENST00000487633 H3BNC9 293 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 GRM6O15303 877 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 GALR2O43603 387 aaPredicted RBP7.13□□□□□ -1.27
COL4A3-206ENST00000487633 PRKAB2O43741 272 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 CABYRO75952 493 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 BAIAP3O94812 1187 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 KCNJ6P48051 423 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 SIGLEC14Q08ET2 396 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 HIC1Q14526 733 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 FAM47CQ5HY64 1035 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 ATF7IPQ6VMQ6 1270 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 DGLUCYQ7Z3D6 616 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 ADGRD2Q7Z7M1 963 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 CHMP4CQ96CF2 233 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 MSLNLQ96KJ4 702 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 UPF3BQ9BZI7 483 aaKnown RBP7.13□□□□□ -1.27
COL4A3-206ENST00000487633 HOMER2Q9NSB8 354 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 CDH22Q9UJ99 828 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 PCDHGC5Q9Y5F6 944 aa7.13□□□□□ -1.27
COL4A3-206ENST00000487633 PNMA6EA0A0J9YXQ4 647 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 PITPNM1O00562 1244 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 RAD21O60216 631 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 CXCL10P02778 98 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 POLR3DP05423 398 aaPredicted RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 UBTFL1P0CB47 393 aaPredicted RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 RFC2P35250 354 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 RRP1P56182 461 aaKnown RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 SNAP25P60880 206 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 HTRA4P83105 476 aaPredicted RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 CBX2Q14781 532 aaPredicted RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 GORABQ5T7V8 394 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 GDF6Q6KF10 455 aaPredicted RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 TMEM179Q6ZVK1 233 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 RASGRP2Q7LDG7 609 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 TTC6Q86TZ1 520 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 WDR63Q8IWG1 891 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 KIAA2013Q8IYS2 634 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 ANKRD35Q8N283 1001 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 DCLK2Q8N568 766 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 SP7Q8TDD2 431 aaPredicted RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 PRRX2Q99811 253 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 TEX13BQ9BXU2 312 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 NSUN3Q9H649 340 aaKnown RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 A1CFQ9NQ94 594 aaKnown RBP7.12□□□□□ -1.27
COL4A3-206ENST00000487633 INCENPQ9NQS7 918 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 ATRXP46100 2492 aa7.12□□□□□ -1.27
COL4A3-206ENST00000487633 FANCMQ8IYD8 2048 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 MYH7BA7E2Y1 1941 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 SRGAP3O43295 1099 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 IDH1O75874 414 aaKnown RBP7.11□□□□□ -1.27
COL4A3-206ENST00000487633 GLP2RO95838 553 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 SP100P23497 879 aaPredicted RBP7.11□□□□□ -1.27
COL4A3-206ENST00000487633 DNAJB1P25685 340 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 CHMP4BP1P59074 171 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 ZNF200P98182 395 aaPredicted RBP7.11□□□□□ -1.27
COL4A3-206ENST00000487633 SMAD4Q13485 552 aaKnown RBP7.11□□□□□ -1.27
COL4A3-206ENST00000487633 TIGD5Q53EQ6 642 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 MUM1L1Q5H9M0 696 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 TTC39AQ5SRH9 613 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 CNKSR3Q6P9H4 555 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 TMEM192Q8IY95 271 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 LCORLQ8N3X6 602 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 FEZF2Q8TBJ5 459 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 NKD2Q969F2 451 aaPredicted RBP7.11□□□□□ -1.27
COL4A3-206ENST00000487633 COL26A1Q96A83 441 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 RPGRIP1Q96KN7 1286 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 RIPOR3Q96MK2 946 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 SLF1Q9BQI6 1058 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 AP5M1Q9H0R1 490 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 DCP1AQ9NPI6 582 aaPredicted RBP7.11□□□□□ -1.27
COL4A3-206ENST00000487633 MCM9Q9NXL9 1143 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 BARX2Q9UMQ3 279 aaPredicted RBP7.11□□□□□ -1.27
COL4A3-206ENST00000487633 TNNQ9UQP3 1299 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 CHD8Q9HCK8 2581 aa7.11□□□□□ -1.27
COL4A3-206ENST00000487633 OTOGLQ3ZCN5 2332 aa7.1□□□□□ -1.27
COL4A3-206ENST00000487633 PTPRCP08575 1304 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms