RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, human

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-215	ENST00000487620	ADAMTS2	O95450	1211 aa		10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	CORO7	P57737	925 aa		10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	LETM2	Q2VYF4	491 aa		10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	TTC31	Q49AM3	519 aa	Predicted RBP	10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	DNAJC21	Q5F1R6	531 aa	Known RBP	10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	CREG2	Q8IUH2	290 aa		10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	PURB	Q96QR8	312 aa	Known RBP	10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	IL17RB	Q9NRM6	502 aa		10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	FAM184B	Q9ULE4	1060 aa		10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	SNX12	Q9UMY4	172 aa		10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	JRKL	Q9Y4A0	524 aa		10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	MYH14	Q7Z406	1995 aa	Known RBP	10.9	□□□□□ -0.67
ZNF3-215	ENST00000487620	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	DOT1L	Q8TEK3	1739 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	SCN7A	Q01118	1682 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	USP17L3	A6NCW0	530 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	USP17L4	A6NCW7	530 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	USP17L1	Q7RTZ2	530 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	PACS2	Q86VP3	889 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	PLCD3	Q8N3E9	789 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	DYNLL2	Q96FJ2	89 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	SLC39A2	Q9NP94	309 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	BSDC1	Q9NW68	430 aa	Predicted RBP	10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	SMARCAL1	Q9NZC9	954 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	DMGDH	Q9UI17	866 aa	Known RBP	10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	MAD2L2	Q9UI95	211 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	PCDHA13	Q9Y5I0	950 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	LAMB2	P55268	1798 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	GOLGA8H	P0CJ92	632 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	TEC	P42680	631 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	CCDC181	Q5TID7	509 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	NFRKB	Q6P4R8	1299 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	BICDL1	Q6ZP65	573 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	AEN	Q8WTP8	325 aa	Known RBP	10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	CELF1	Q92879	486 aa	Known RBP	10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	CPVL	Q9H3G5	476 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	MMRN2	Q9H8L6	949 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	MKNK2	Q9HBH9	465 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	EHD2	Q9NZN4	543 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	ARHGAP20	Q9P2F6	1191 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	STX8	Q9UNK0	236 aa		10.89	□□□□□ -0.67
ZNF3-215	ENST00000487620	RREB1	Q92766	1687 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	FLT1	P17948	1338 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	KIAA1551	Q9HCM1	1747 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	EPHB6	O15197	1021 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	CYTH3	O43739	400 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	AKR1B10	O60218	316 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	KIF11	P52732	1056 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	TTC19	Q6DKK2	380 aa	Predicted RBP	10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	AMOTL1	Q8IY63	956 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	ANKRD13C	Q8N6S4	541 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	SPATA4	Q8NEY3	305 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	PPM1E	Q8WY54	764 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	ERGIC2	Q96RQ1	377 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	SH2D4A	Q9H788	454 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	EFCC1	Q9HA90	598 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	CCDC88A	Q3V6T2	1871 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620		A0A1W2PQJ5	194 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	STXBP3	O00186	592 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	LAD1	O00515	517 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	OR52Z1	P0C646	297 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	EIF4A3	P38919	411 aa	Known RBP	10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	NOP2	P46087	812 aa	Known RBP	10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	CCT5	P48643	541 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	ITPK1	Q13572	414 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	SLC35G1	Q2M3R5	365 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	DGKH	Q86XP1	1220 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	MMGT1	Q8N4V1	131 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	OSBPL9	Q96SU4	736 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	EHD4	Q9H223	541 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	CUEDC2	Q9H467	287 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	BARHL2	Q9NY43	387 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	PLAGL2	Q9UPG8	496 aa		10.88	□□□□□ -0.67
ZNF3-215	ENST00000487620	LOC102724428	A0A0B4J2F2	783 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	NCK2	O43639	380 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	TSPY3	P0CV98	308 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	TSPY8	P0CW00	308 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	PRPH	P41219	470 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	NAPA	P54920	295 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	SIK1	P57059	783 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	CDK17	Q00537	523 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	ATP2B2	Q01814	1243 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	GRM4	Q14833	912 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	SBK1	Q52WX2	424 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	CNNM4	Q6P4Q7	775 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	RRAGA	Q7L523	313 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	DZIP1	Q86YF9	867 aa	Known RBP	10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	KIAA0895	Q8NCT3	520 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	ALS2CR12	Q96Q35	445 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	SEMA6B	Q9H3T3	888 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	SHOX2	O60902	331 aa	Predicted RBP	10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	HIBADH	P31937	336 aa	Known RBP	10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	GNAQ	P50148	359 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	IRAK1	P51617	712 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	NAP1L1	P55209	391 aa	Known RBP	10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	AMPD3	Q01432	767 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	FIGN	Q5HY92	759 aa		10.87	□□□□□ -0.67
ZNF3-215	ENST00000487620	FBXO33	Q7Z6M2	555 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms