RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 LMCD1Q9NZU5 365 aa8.03□□□□□ -1.12
CUL3-211ENST00000487558 LRRC10BA6NIK2 292 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 FAM155AB1AL88 458 aaPredicted RBP8.02□□□□□ -1.13
CUL3-211ENST00000487558 C6orf222P0C671 652 aaPredicted RBP8.02□□□□□ -1.13
CUL3-211ENST00000487558 TNK2Q07912 1038 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 KCNMB1Q16558 191 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 CNNM4Q6P4Q7 775 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 MAMDC2Q7Z304 686 aaPredicted RBP8.02□□□□□ -1.13
CUL3-211ENST00000487558 LRRTM3Q86VH5 581 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 AHI1Q8N157 1196 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 TMEM145Q8NBT3 493 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 GPATCH2Q9NW75 528 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 CAPN6Q9Y6Q1 641 aa8.02□□□□□ -1.13
CUL3-211ENST00000487558 PRR33A8MZF0 331 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 SDSP20132 328 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 SLC35F1Q5T1Q4 408 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 FYB2Q5VWT5 728 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 RPUSD2Q8IZ73 545 aaKnown RBP8.01□□□□□ -1.13
CUL3-211ENST00000487558 GSTCDQ8NEC7 633 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 SLC7A14Q8TBB6 771 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 DCAF4Q8WV16 495 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 DDX1Q92499 740 aaKnown RBP8.01□□□□□ -1.13
CUL3-211ENST00000487558 HDAC8Q9BY41 377 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 SLC52A2Q9HAB3 445 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 TRIM39Q9HCM9 518 aa8.01□□□□□ -1.13
CUL3-211ENST00000487558 SHISA3A0PJX4 238 aa8□□□□□ -1.13
CUL3-211ENST00000487558 BLACEA4D250 179 aa8□□□□□ -1.13
CUL3-211ENST00000487558 CD3EP07766 207 aa8□□□□□ -1.13
CUL3-211ENST00000487558 NAT1P18440 290 aa8□□□□□ -1.13
CUL3-211ENST00000487558 NFKB2Q00653 900 aa8□□□□□ -1.13
CUL3-211ENST00000487558 SCRN1Q12765 414 aa8□□□□□ -1.13
CUL3-211ENST00000487558 USP53Q70EK8 1073 aa8□□□□□ -1.13
CUL3-211ENST00000487558 BRAPQ7Z569 592 aa8□□□□□ -1.13
CUL3-211ENST00000487558 PPM1KQ8N3J5 372 aa8□□□□□ -1.13
CUL3-211ENST00000487558 MAGEB10Q96LZ2 347 aaPredicted RBP8□□□□□ -1.13
CUL3-211ENST00000487558 TARS2Q9BW92 718 aaKnown RBP8□□□□□ -1.13
CUL3-211ENST00000487558 DDX56Q9NY93 547 aaKnown RBP8□□□□□ -1.13
CUL3-211ENST00000487558 MINPP1Q9UNW1 487 aa8□□□□□ -1.13
CUL3-211ENST00000487558 ATP8A1Q9Y2Q0 1164 aa8□□□□□ -1.13
CUL3-211ENST00000487558 ST14Q9Y5Y6 855 aa8□□□□□ -1.13
CUL3-211ENST00000487558 BACE2Q9Y5Z0 518 aa8□□□□□ -1.13
CUL3-211ENST00000487558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.99□□□□□ -1.13
CUL3-211ENST00000487558 C2orf71A6NGG8 1288 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 GSG1L2A8MUP6 293 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 AQP7O14520 342 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 AURKAO14965 403 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 ASLP04424 464 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 SRFP11831 508 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 CPEP16870 476 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 BMP8BP34820 402 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 FLT3P36888 993 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 CTSKP43235 329 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 AFMP43652 599 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 NTRK3Q16288 839 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 MLANAQ16655 118 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 CRTC3Q6UUV7 619 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 DDX46Q7L014 1031 aaKnown RBP7.99□□□□□ -1.13
CUL3-211ENST00000487558 RNF180Q86T96 592 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 COPS5Q92905 334 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 TCTN2Q96GX1 697 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 LIN37Q96GY3 246 aaPredicted RBP7.99□□□□□ -1.13
CUL3-211ENST00000487558 C1orf159Q96HA4 380 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 DUSP15Q9H1R2 295 aaPredicted RBP7.99□□□□□ -1.13
CUL3-211ENST00000487558 SEMA3GQ9NS98 782 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 TYW1Q9NV66 732 aaKnown RBP7.99□□□□□ -1.13
CUL3-211ENST00000487558 MCM8Q9UJA3 840 aa7.99□□□□□ -1.13
CUL3-211ENST00000487558 SSU72P8A0A1W2PR75 194 aa7.98□□□□□ -1.13
CUL3-211ENST00000487558 OPA1O60313 960 aa7.98□□□□□ -1.13
CUL3-211ENST00000487558 DNAJC8O75937 253 aaPredicted RBP7.98□□□□□ -1.13
CUL3-211ENST00000487558 SEPHS1P49903 392 aa7.98□□□□□ -1.13
CUL3-211ENST00000487558 PRSS53Q2L4Q9 553 aa7.98□□□□□ -1.13
CUL3-211ENST00000487558 KRTAP19-4Q3LI73 84 aa7.98□□□□□ -1.13
CUL3-211ENST00000487558 STYK1Q6J9G0 422 aa7.98□□□□□ -1.13
CUL3-211ENST00000487558 FCRL3Q96P31 734 aaPredicted RBP7.98□□□□□ -1.13
CUL3-211ENST00000487558 B4E1Z4 1266 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 STXBP3O00186 592 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 NPTXRO95502 500 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 VAV1P15498 845 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 POU3F2P20265 443 aaPredicted RBP7.97□□□□□ -1.13
CUL3-211ENST00000487558 IGFALSP35858 605 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 NEK4P51957 841 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 PCBP3P57721 371 aaKnown RBP7.97□□□□□ -1.13
CUL3-211ENST00000487558 ACBD5Q5T8D3 534 aaPredicted RBP7.97□□□□□ -1.13
CUL3-211ENST00000487558 WWC2Q6AWC2 1192 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 RSPO2Q6UXX9 243 aaPredicted RBP7.97□□□□□ -1.13
CUL3-211ENST00000487558 UBE2R2Q712K3 238 aaPredicted RBP7.97□□□□□ -1.13
CUL3-211ENST00000487558 TSPYL5Q86VY4 417 aaPredicted RBP7.97□□□□□ -1.13
CUL3-211ENST00000487558 UBR7Q8N806 425 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 KREMEN2Q8NCW0 462 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 HSPA12BQ96MM6 686 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 ZFYVE21Q9BQ24 234 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 MCMBPQ9BTE3 642 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 CARS2Q9HA77 564 aaKnown RBP7.97□□□□□ -1.13
CUL3-211ENST00000487558 HOMER2Q9NSB8 354 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 C19orf73Q9NVV2 129 aa7.97□□□□□ -1.13
CUL3-211ENST00000487558 TNPO3Q9Y5L0 923 aaKnown RBP7.97□□□□□ -1.13
CUL3-211ENST00000487558 RBAK-RBAKDNI3L0D1 243 aa7.96□□□□□ -1.14
CUL3-211ENST00000487558 MEFVO15553 781 aaPredicted RBP7.96□□□□□ -1.14
CUL3-211ENST00000487558 THBDP07204 575 aa7.96□□□□□ -1.14
CUL3-211ENST00000487558 CYP4F3Q08477 520 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms