RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SMPD1P17405 629 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
SPEN-205ENST00000487496 TLE2Q04725 743 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 GRM4Q14833 912 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 NECTIN1Q15223 517 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 GNASQ5JWF2 1037 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 TMEM63BQ5T3F8 832 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 NOL8Q76FK4 1167 aaKnown RBP13.34□□□□□ -0.27
SPEN-205ENST00000487496 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 PCSK9Q8NBP7 692 aaKnown RBP13.34□□□□□ -0.27
SPEN-205ENST00000487496 NUP133Q8WUM0 1156 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 STARD7Q9NQZ5 370 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 PRKAG2Q9UGJ0 569 aa13.34□□□□□ -0.27
SPEN-205ENST00000487496 ASGR1P07306 291 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 PTGS1P23219 599 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 EDNRBP24530 442 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 SLC35G1Q2M3R5 365 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 CATIPQ7Z7H3 387 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 DNERQ8NFT8 737 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 GLT1D1Q96MS3 346 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 MPHOSPH6Q99547 160 aaKnown RBP13.33□□□□□ -0.28
SPEN-205ENST00000487496 AMNQ9BXJ7 453 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 UBE2OQ9C0C9 1292 aaKnown RBP13.33□□□□□ -0.28
SPEN-205ENST00000487496 PRDM5Q9NQX1 630 aaPredicted RBP13.33□□□□□ -0.28
SPEN-205ENST00000487496 MRPL11Q9Y3B7 192 aaKnown RBP13.33□□□□□ -0.28
SPEN-205ENST00000487496 LCTP09848 1927 aa13.33□□□□□ -0.28
SPEN-205ENST00000487496 ZBTB5O15062 677 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 DYNC1LI2O43237 492 aaPredicted RBP13.32□□□□□ -0.28
SPEN-205ENST00000487496 PRC1O43663 620 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 PPP1R11O60927 126 aaPredicted RBP13.32□□□□□ -0.28
SPEN-205ENST00000487496 CDC45O75419 566 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 MCM5P33992 734 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 BEX3Q00994 111 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 PDE4DQ08499 809 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
SPEN-205ENST00000487496 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 SH3RF1Q7Z6J0 888 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 TLK2Q86UE8 772 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
SPEN-205ENST00000487496 LBHD1Q9BQE6 289 aaPredicted RBP13.32□□□□□ -0.28
SPEN-205ENST00000487496 MTA3Q9BTC8 594 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 LY9Q9HBG7 655 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 GPHNQ9NQX3 736 aaPredicted RBP13.32□□□□□ -0.28
SPEN-205ENST00000487496 PDLIM7Q9NR12 457 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 Q9Y3F1 56 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
SPEN-205ENST00000487496 ELP1O95163 1332 aa13.32□□□□□ -0.28
SPEN-205ENST00000487496 RBM47A0AV96 593 aaKnown RBP13.31□□□□□ -0.28
SPEN-205ENST00000487496 TRIM43BA6NCK2 446 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 B4DLN1 442 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 CYTH3O43739 400 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 PQBP1O60828 265 aaKnown RBP13.31□□□□□ -0.28
SPEN-205ENST00000487496 MRPL12P52815 198 aaKnown RBP13.31□□□□□ -0.28
SPEN-205ENST00000487496 FSCN1Q16658 493 aaKnown RBP13.31□□□□□ -0.28
SPEN-205ENST00000487496 DUSP28Q4G0W2 176 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 ANKRD33Q7Z3H0 272 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 HOMER1Q86YM7 354 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 TDHQ8IZJ6 230 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 VTI1AQ96AJ9 217 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 TRIM43Q96BQ3 446 aaPredicted RBP13.31□□□□□ -0.28
SPEN-205ENST00000487496 TOX2Q96NM4 488 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 TAAR1Q96RJ0 339 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 PIGSQ96S52 555 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
SPEN-205ENST00000487496 LRRC37A2A6NM11 1700 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 SH2B2O14492 632 aaPredicted RBP13.3□□□□□ -0.28
SPEN-205ENST00000487496 OPLAHO14841 1288 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 DDAH1O94760 285 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 CLTBP09497 229 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 CDK7P50613 346 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 FAAP100Q0VG06 881 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 CXCL17Q6UXB2 119 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 TMTC2Q8N394 836 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 NSUN6Q8TEA1 469 aaKnown RBP13.3□□□□□ -0.28
SPEN-205ENST00000487496 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 RMDN3Q96TC7 470 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 MAP3K14Q99558 947 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 PCDHA1Q9Y5I3 950 aa13.3□□□□□ -0.28
SPEN-205ENST00000487496 PNMA6FA0A0J9YX94 578 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 A0A0U1RQG5 324 aaPredicted RBP13.29□□□□□ -0.28
SPEN-205ENST00000487496 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 ARVCFO00192 962 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 SOX1O00570 391 aaPredicted RBP13.29□□□□□ -0.28
SPEN-205ENST00000487496 KIAA0355O15063 1070 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 ZEB2O60315 1214 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 CFBP00751 764 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 NEFLP07196 543 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 ITGB8P26012 769 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 KIF5BP33176 963 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 LIFRP42702 1097 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 GHRHRQ02643 423 aa13.29□□□□□ -0.28
SPEN-205ENST00000487496 TRAF1Q13077 416 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms