RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 SLC35G1Q2M3R5 365 aa11.93□□□□□ -0.5
RNF220-215ENST00000487332 CCDC144BQ3MJ40 725 aa11.93□□□□□ -0.5
RNF220-215ENST00000487332 USH1GQ495M9 461 aa11.93□□□□□ -0.5
RNF220-215ENST00000487332 GJC2Q5T442 439 aaPredicted RBP11.93□□□□□ -0.5
RNF220-215ENST00000487332 IQSEC1Q6DN90 963 aa11.93□□□□□ -0.5
RNF220-215ENST00000487332 CCSAPQ6IQ19 270 aaPredicted RBP11.93□□□□□ -0.5
RNF220-215ENST00000487332 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
RNF220-215ENST00000487332 FBXL16Q8N461 479 aa11.93□□□□□ -0.5
RNF220-215ENST00000487332 PCSK9Q8NBP7 692 aaKnown RBP11.93□□□□□ -0.5
RNF220-215ENST00000487332 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
RNF220-215ENST00000487332 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
RNF220-215ENST00000487332 GNEQ9Y223 722 aaKnown RBP11.93□□□□□ -0.5
RNF220-215ENST00000487332 NID2Q14112 1375 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 PNMA6FA0A0J9YX94 578 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 NKRFO15226 690 aaKnown RBP eCLIP11.92□□□□□ -0.5
RNF220-215ENST00000487332 CYTH3O43739 400 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
RNF220-215ENST00000487332 PPP1R11O60927 126 aaPredicted RBP11.92□□□□□ -0.5
RNF220-215ENST00000487332 HSPA4P34932 840 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 EXOSC10Q01780 885 aaKnown RBP11.92□□□□□ -0.5
RNF220-215ENST00000487332 TNFAIP2Q03169 654 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 ANO1Q5XXA6 986 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 TAPT1Q6NXT6 567 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 DHX32Q7L7V1 743 aaKnown RBP11.92□□□□□ -0.5
RNF220-215ENST00000487332 TEX2Q8IWB9 1127 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 C7orf61Q8IZ16 206 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 SYTL5Q8TDW5 730 aaPredicted RBP11.92□□□□□ -0.5
RNF220-215ENST00000487332 IWS1Q96ST2 819 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 SEZ6LQ9BYH1 1024 aa11.92□□□□□ -0.5
RNF220-215ENST00000487332 SENP6Q9GZR1 1112 aaPredicted RBP11.92□□□□□ -0.5
RNF220-215ENST00000487332 ELP1O95163 1332 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 FRMPD4Q14CM0 1322 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 A0A1W2PQ45 241 aaPredicted RBP11.91□□□□□ -0.5
RNF220-215ENST00000487332 A0A1W2PQY0 241 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 OPLAHO14841 1288 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 PGK1P00558 417 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 CALML3P27482 149 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 BMP8BP34820 402 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 RTP1P59025 263 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 DUSP28Q4G0W2 176 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 SLC39A5Q6ZMH5 540 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 TLK2Q86UE8 772 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 FBXO16Q8IX29 292 aaPredicted RBP11.91□□□□□ -0.5
RNF220-215ENST00000487332 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 NSUN6Q8TEA1 469 aaKnown RBP11.91□□□□□ -0.5
RNF220-215ENST00000487332 NUP133Q8WUM0 1156 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 LENG1Q96BZ8 264 aaPredicted RBP11.91□□□□□ -0.5
RNF220-215ENST00000487332 RBM28Q9NW13 759 aaKnown RBP11.91□□□□□ -0.5
RNF220-215ENST00000487332 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
RNF220-215ENST00000487332 MROH7Q68CQ1 1323 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
RNF220-215ENST00000487332 CTAGE5O15320 804 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 CABYRO75952 493 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 ADCYAP1R1P41586 468 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 ACLYP53396 1101 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 PDE4DQ08499 809 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 COL9A3Q14050 684 aaPredicted RBP11.9□□□□□ -0.5
RNF220-215ENST00000487332 PPP2R5BQ15173 497 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 APOA5Q6Q788 366 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 NFXL1Q6ZNB6 911 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 SCFD2Q8WU76 684 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 PIGSQ96S52 555 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 GDF15Q99988 308 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 AGXT2Q9BYV1 514 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 PCDHA1Q9Y5I3 950 aa11.9□□□□□ -0.5
RNF220-215ENST00000487332 LTBP2Q14767 1821 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 ZEB2O60315 1214 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 EIF5BO60841 1220 aaKnown RBP11.89□□□□□ -0.51
RNF220-215ENST00000487332 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
RNF220-215ENST00000487332 SMPD1P17405 629 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 ADCK5Q3MIX3 580 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
RNF220-215ENST00000487332 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 TMTC3Q6ZXV5 915 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
RNF220-215ENST00000487332 TOX2Q96NM4 488 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 PURBQ96QR8 312 aaKnown RBP11.89□□□□□ -0.51
RNF220-215ENST00000487332 MYL10Q9BUA6 226 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 VAT1LQ9HCJ6 419 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 GPHNQ9NQX3 736 aaPredicted RBP11.89□□□□□ -0.51
RNF220-215ENST00000487332 STARD7Q9NQZ5 370 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 PXMP2Q9NR77 195 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 COL20A1Q9P218 1284 aa11.89□□□□□ -0.51
RNF220-215ENST00000487332 A0A0U1RQG5 324 aaPredicted RBP11.88□□□□□ -0.51
RNF220-215ENST00000487332 MYADML2A6NDP7 307 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 hCG_1984214I3L0E3 225 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 PIK3CDO00329 1044 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 ASGR1P07306 291 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 PSMA5P28066 241 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 KCNA10Q16322 511 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 FSCN1Q16658 493 aaKnown RBP11.88□□□□□ -0.51
RNF220-215ENST00000487332 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 SRBD1Q8N5C6 995 aaKnown RBP11.88□□□□□ -0.51
RNF220-215ENST00000487332 ZNF713Q8N859 430 aaPredicted RBP11.88□□□□□ -0.51
RNF220-215ENST00000487332 FANCBQ8NB91 859 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 GLT1D1Q96MS3 346 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 RMDN3Q96TC7 470 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms