RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 BAATQ14032 418 aaPredicted RBP23■■□□□ 1.27
SMPDL3A-202ENST00000487215 PPP2R2DQ66LE6 453 aa23■■□□□ 1.27
SMPDL3A-202ENST00000487215 ZBBXA8MT70 800 aa22.99■■□□□ 1.27
SMPDL3A-202ENST00000487215 RANBP6O60518 1105 aaKnown RBP22.99■■□□□ 1.27
SMPDL3A-202ENST00000487215 COL9A1P20849 921 aa22.99■■□□□ 1.27
SMPDL3A-202ENST00000487215 ALDH5A1P51649 535 aaPredicted RBP22.99■■□□□ 1.27
SMPDL3A-202ENST00000487215 TTBK2Q6IQ55 1244 aa22.99■■□□□ 1.27
SMPDL3A-202ENST00000487215 DCAF4Q8WV16 495 aa22.99■■□□□ 1.27
SMPDL3A-202ENST00000487215 TRMT13Q9NUP7 481 aaKnown RBP22.99■■□□□ 1.27
SMPDL3A-202ENST00000487215 PCDHA11Q9Y5I1 949 aa22.99■■□□□ 1.27
SMPDL3A-202ENST00000487215 NFIBO00712 420 aa22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 CYP2C9P11712 490 aa22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 SLC16A2P36021 539 aa22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 UHRF1Q96T88 793 aaPredicted RBP22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 WDR11Q9BZH6 1224 aa22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 POLR3EQ9NVU0 708 aa22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 CHD7Q9P2D1 2997 aa22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 ADD3Q9UEY8 706 aaKnown RBP22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 ANAPC4Q9UJX5 808 aa22.98■■□□□ 1.27
SMPDL3A-202ENST00000487215 ATP2A2P16615 1042 aaKnown RBP22.97■■□□□ 1.27
SMPDL3A-202ENST00000487215 MX1P20591 662 aa22.97■■□□□ 1.27
SMPDL3A-202ENST00000487215 PURAQ00577 322 aaKnown RBP22.97■■□□□ 1.27
SMPDL3A-202ENST00000487215 TTLL4Q14679 1199 aa22.97■■□□□ 1.27
SMPDL3A-202ENST00000487215 VPS53Q5VIR6 699 aa22.97■■□□□ 1.27
SMPDL3A-202ENST00000487215 BTNL9Q6UXG8 535 aa22.97■■□□□ 1.27
SMPDL3A-202ENST00000487215 TNKSO95271 1327 aa22.97■■□□□ 1.27
SMPDL3A-202ENST00000487215 LOC102724159A0A0B4J2E5 919 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 RBM47A0AV96 593 aaKnown RBP22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 ORC4O43929 436 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 PFKMP08237 780 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 MYL3P08590 195 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 SUPT20HL2P0C7V6 817 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 CPT1AP50416 773 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 PWP2Q15269 919 aaKnown RBP22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 SYDE2Q5VT97 1194 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 SLC30A10Q6XR72 485 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
SMPDL3A-202ENST00000487215 PTPDC1A2A3K4 754 aa22.95■■□□□ 1.26
SMPDL3A-202ENST00000487215 FGRP09769 529 aa22.95■■□□□ 1.26
SMPDL3A-202ENST00000487215 FRMPD2Q68DX3 1309 aaPredicted RBP22.95■■□□□ 1.26
SMPDL3A-202ENST00000487215 DEFB128Q7Z7B8 93 aa22.95■■□□□ 1.26
SMPDL3A-202ENST00000487215 MICALL1Q8N3F8 863 aa22.95■■□□□ 1.26
SMPDL3A-202ENST00000487215 IL27Q8NEV9 243 aa22.95■■□□□ 1.26
SMPDL3A-202ENST00000487215 OR6J1Q8NGC5 347 aa22.95■■□□□ 1.26
SMPDL3A-202ENST00000487215 MTG1Q9BT17 334 aaPredicted RBP22.95■■□□□ 1.26
SMPDL3A-202ENST00000487215 SALL3Q9BXA9 1300 aa22.94■■□□□ 1.26
SMPDL3A-202ENST00000487215 CLEC4DQ8WXI8 215 aa22.94■■□□□ 1.26
SMPDL3A-202ENST00000487215 TMEM47Q9BQJ4 181 aa22.94■■□□□ 1.26
SMPDL3A-202ENST00000487215 TSPYL2Q9H2G4 693 aaPredicted RBP22.94■■□□□ 1.26
SMPDL3A-202ENST00000487215 GPCPD1Q9NPB8 672 aa22.94■■□□□ 1.26
SMPDL3A-202ENST00000487215 TOP1P11387 765 aaKnown RBP22.93■■□□□ 1.26
SMPDL3A-202ENST00000487215 CALML3P27482 149 aa22.93■■□□□ 1.26
SMPDL3A-202ENST00000487215 FAM47CQ5HY64 1035 aa22.93■■□□□ 1.26
SMPDL3A-202ENST00000487215 GPHNQ9NQX3 736 aaPredicted RBP22.93■■□□□ 1.26
SMPDL3A-202ENST00000487215 TOMM22Q9NS69 142 aa22.93■■□□□ 1.26
SMPDL3A-202ENST00000487215 MYO9BQ13459 2157 aa22.93■■□□□ 1.26
SMPDL3A-202ENST00000487215 CA3P07451 260 aa22.92■■□□□ 1.26
SMPDL3A-202ENST00000487215 ALX1Q15699 326 aa22.92■■□□□ 1.26
SMPDL3A-202ENST00000487215 NBPF20Q3BBV1 942 aa22.92■■□□□ 1.26
SMPDL3A-202ENST00000487215 TMEM67Q5HYA8 995 aa22.92■■□□□ 1.26
SMPDL3A-202ENST00000487215 RRP12Q5JTH9 1297 aaKnown RBP22.92■■□□□ 1.26
SMPDL3A-202ENST00000487215 RNF207Q6ZRF8 634 aa22.92■■□□□ 1.26
SMPDL3A-202ENST00000487215 PPP1R13LQ8WUF5 828 aa22.92■■□□□ 1.26
SMPDL3A-202ENST00000487215 RAPGEFL1Q9UHV5 662 aa22.92■■□□□ 1.26
SMPDL3A-202ENST00000487215 RFXAPO00287 272 aa22.91■■□□□ 1.26
SMPDL3A-202ENST00000487215 PPP2R5BQ15173 497 aa22.91■■□□□ 1.26
SMPDL3A-202ENST00000487215 NECAB3Q96P71 396 aaPredicted RBP22.91■■□□□ 1.26
SMPDL3A-202ENST00000487215 RAD50Q92878 1312 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 NKRFO15226 690 aaKnown RBP eCLIP22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 PDHBP11177 359 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 ACTN1P12814 892 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 BMP1P13497 986 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 EDNRBP24530 442 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 RFC2P35250 354 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 RPS6P62753 249 aaKnown RBP22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 TFF2Q03403 129 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 PDE4DQ08499 809 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 BRDTQ58F21 947 aaPredicted RBP22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 COPS5Q92905 334 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 TCP11L1Q9NUJ3 509 aa22.9■■□□□ 1.26
SMPDL3A-202ENST00000487215 SCN5AQ14524 2016 aa22.89■■□□□ 1.26
SMPDL3A-202ENST00000487215 SCN10AQ9Y5Y9 1956 aa22.89■■□□□ 1.26
SMPDL3A-202ENST00000487215 A6NJR5 290 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 PITPNM1O00562 1244 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 FGAP02671 866 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 IQCF3P0C7M6 154 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 NFRKBQ6P4R8 1299 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 SCFD2Q8WU76 684 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 EVI5LQ96CN4 794 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 SLC9A7Q96T83 725 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 CERS4Q9HA82 394 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 HELLSQ9NRZ9 838 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 PNMA2Q9UL42 364 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 MTCH2Q9Y6C9 303 aa22.89■■□□□ 1.25
SMPDL3A-202ENST00000487215 WDR19Q8NEZ3 1342 aa22.88■■□□□ 1.25
SMPDL3A-202ENST00000487215 REV3LO60673 3130 aa22.88■■□□□ 1.25
SMPDL3A-202ENST00000487215 EPOPA6NHQ4 379 aa22.88■■□□□ 1.25
SMPDL3A-202ENST00000487215 KPNA6O60684 536 aa22.88■■□□□ 1.25
SMPDL3A-202ENST00000487215 POU3F3P20264 500 aaPredicted RBP22.88■■□□□ 1.25
SMPDL3A-202ENST00000487215 ZNF543Q08ER8 600 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms