RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ECE2O60344 883 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 ATP2C1P98194 919 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 GRIK5Q16478 980 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 P2RX5Q93086 422 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 NT5C3AQ9H0P0 336 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 TMEM60Q9H2L4 133 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 BCCIPQ9P287 314 aaKnown RBP eCLIP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 HARSP12081 509 aaKnown RBP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 BMP3P12645 472 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 RPL13P26373 211 aaKnown RBP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 ARL6IP4Q66PJ3 421 aaKnown RBP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 TMC4Q7Z404 712 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 NAP1L4Q99733 375 aaKnown RBP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 GOPCQ9HD26 462 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 CNTNAP5Q8WYK1 1306 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 RCAN1P53805 252 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 CYP27A1Q02318 531 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 SEC23AQ15436 765 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 SLC10A5Q5PT55 438 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 TOGARAM2Q6ZUX3 1019 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 PNMA6FA0A0J9YX94 578 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 VEGFAP15692 232 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-216ENST00000486741 CYP2J2P51589 502 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 EN1Q05925 392 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-216ENST00000486741 RGS22Q8NE09 1264 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 PCDHA6Q9UN73 950 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 PCDHA8Q9Y5H6 950 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 EPB41P11171 864 aaKnown RBP14.68□□□□□ -0.06
HMGN1-216ENST00000486741 PPP1R2P41236 205 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 MTF1Q14872 753 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 SLC35F6Q8N357 371 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 CHURC1Q8WUH1 139 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 CTNNBL1Q8WYA6 563 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-216ENST00000486741 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 SFI1A8K8P3 1242 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 SBK1Q52WX2 424 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 SP8Q8IXZ3 490 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 ADGRF4Q8IZF3 695 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 IFT81Q8WYA0 676 aa14.68□□□□□ -0.06
HMGN1-216ENST00000486741 IFIH1Q9BYX4 1025 aaKnown RBP14.68□□□□□ -0.06
HMGN1-216ENST00000486741 TESPA1A2RU30 521 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-216ENST00000486741 BAG6P46379 1132 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 ADAM9Q13443 819 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 TBC1D5Q92609 795 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 LSM14BQ9BX40 385 aaKnown RBP14.67□□□□□ -0.06
HMGN1-216ENST00000486741 SPTLC3Q9NUV7 552 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 FOXP2O15409 715 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 POLR2FP61218 127 aaKnown RBP14.67□□□□□ -0.06
HMGN1-216ENST00000486741 CKAP4Q07065 602 aaKnown RBP14.67□□□□□ -0.06
HMGN1-216ENST00000486741 MAP3K14Q99558 947 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 NUP58Q9BVL2 599 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 ZNF277Q9NRM2 450 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-216ENST00000486741 SETD1AO15047 1707 aaKnown RBP14.67□□□□□ -0.06
HMGN1-216ENST00000486741 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 BUB1O43683 1085 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 KLHL30Q0D2K2 578 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 CCDC84Q86UT8 332 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-216ENST00000486741 NKX2-3Q8TAU0 364 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 IL17RAQ96F46 866 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 AK8Q96MA6 479 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 IRX2Q9BZI1 471 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-216ENST00000486741 PICK1Q9NRD5 415 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 RWDD2AQ9UIY3 292 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 FRMD4BQ9Y2L6 1034 aa14.67□□□□□ -0.06
HMGN1-216ENST00000486741 GCOM1H8Y6P7 765 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-216ENST00000486741 LAD1O00515 517 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 EXOC3O60645 756 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 ERLIN2O94905 339 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 POLR2MP0CAP2 368 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 FCER1AP12319 257 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 DNAJC21Q5F1R6 531 aaKnown RBP14.66□□□□□ -0.06
HMGN1-216ENST00000486741 SLC27A3Q5K4L6 730 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 PODNQ7Z5L7 613 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 TAX1BP1Q86VP1 789 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 SECISBP2LQ93073 1101 aaKnown RBP14.66□□□□□ -0.06
HMGN1-216ENST00000486741 SALL1Q9NSC2 1324 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 FLOT1O75955 427 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 ARHGAP44Q17R89 818 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 TCP11X2Q5H9J9 407 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 PPP4R3AQ6IN85 833 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 NAA15Q9BXJ9 866 aaKnown RBP14.66□□□□□ -0.06
HMGN1-216ENST00000486741 GTPBP4Q9BZE4 634 aaKnown RBP14.66□□□□□ -0.06
HMGN1-216ENST00000486741 MTMR4Q9NYA4 1195 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 ANAPC4Q9UJX5 808 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 CLIC2O15247 247 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 SLC9C1Q4G0N8 1177 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 DHX36Q9H2U1 1008 aaKnown RBP14.66□□□□□ -0.06
HMGN1-216ENST00000486741 TUBE1Q9UJT0 475 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-216ENST00000486741 E9PMD0 336 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 F5H6K3 240 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 SLURP2P0DP57 97 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 KLRC3Q07444 240 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 NFIAQ12857 509 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 QRICH1Q2TAL8 776 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 ANO3Q9BYT9 981 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 CCPG1Q9ULG6 757 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 MYO6Q9UM54 1294 aa14.66□□□□□ -0.06
HMGN1-216ENST00000486741 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-216ENST00000486741 STAT3P40763 770 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms