RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 NOL6Q9H6R4 1146 aaKnown RBP5.72□□□□□ -1.49
R3HDM1-217ENST00000486532 PHAXQ9H814 394 aaKnown RBP5.72□□□□□ -1.49
R3HDM1-217ENST00000486532 PMF1-BGLAPU3KQ54 211 aa5.72□□□□□ -1.49
R3HDM1-217ENST00000486532 PPM1BO75688 479 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 ADRB1P08588 477 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 NCKAP1LP55160 1127 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 FOXO4P98177 505 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 SLC9A5Q14940 896 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 ZFYVE27Q5T4F4 411 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 PPFIBP1Q86W92 1011 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 PEX11GQ96HA9 241 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 SUSD2Q9UGT4 822 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 ZNF451Q9Y4E5 1061 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 CLSPNQ9HAW4 1339 aa5.71□□□□□ -1.5
R3HDM1-217ENST00000486532 ZBTB7AO95365 584 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 ZNF16P17020 682 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 SLURP1P55000 103 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 PLP2Q04941 152 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 SKOR2Q2VWA4 1001 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 HEATR6Q6AI08 1181 aaKnown RBP5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 ZNF654Q8IZM8 581 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 C19orf47Q8N9M1 422 aaKnown RBP5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 NETO2Q8NC67 525 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 ALG3Q92685 438 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 ZDHHC15Q96MV8 337 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 PCDH18Q9HCL0 1135 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 USP40Q9NVE5 1235 aa5.7□□□□□ -1.5
R3HDM1-217ENST00000486532 LIMS1P48059 325 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 SEPHS1P49903 392 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 PRR5P85299 388 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 FANCCQ00597 558 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 ADAT2Q7Z6V5 191 aaKnown RBP5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 LSRQ86X29 649 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 CRACR2BQ8N4Y2 399 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 LZTR1Q8N653 840 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 FNIP1Q8TF40 1166 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 TSPAN17Q96FV3 270 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 BACH2Q9BYV9 841 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 PALD1Q9ULE6 856 aa5.69□□□□□ -1.5
R3HDM1-217ENST00000486532 SH3D21A4FU49 640 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 FFAR3O14843 346 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 AURKAO14965 403 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 NAT2P11245 290 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 FBLN1P23142 703 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 EIF6P56537 245 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 AMPD2Q01433 879 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 SLC7A5Q01650 507 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 GRB10Q13322 594 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 GNPTABQ3T906 1256 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 UBXN11Q5T124 520 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 LIPIQ6XZB0 460 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 SAPCD2Q86UD0 394 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 TEX2Q8IWB9 1127 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 TP53I13Q8NBR0 393 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 SYT8Q8NBV8 401 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 CCDC136Q96JN2 1154 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 HAUS7Q99871 368 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 DDX41Q9UJV9 622 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 PPT2Q9UMR5 302 aa5.68□□□□□ -1.5
R3HDM1-217ENST00000486532 GLI4P10075 376 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 IFNGR1P15260 489 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 PAMP19021 973 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 TACR1P25103 407 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 IRX6P78412 446 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 HTRA3P83110 453 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 PPP2R5DQ14738 602 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 ZNF394Q53GI3 561 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 TTLL7Q6ZT98 887 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 B3GNT8Q7Z7M8 397 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 CPA5Q8WXQ8 436 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 RCC1LQ96I51 464 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 FAM86C1Q9NVL1 165 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 BACE2Q9Y5Z0 518 aa5.67□□□□□ -1.5
R3HDM1-217ENST00000486532 SCAMP3O14828 347 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 NPHS1O60500 1241 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 ASGR2P07307 311 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 EFEMP1Q12805 493 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 ZYXQ15942 572 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 VWA3BQ502W6 1294 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 LDLRAD1Q5T700 205 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 POMZP3Q6PJE2 187 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 USP33Q8TEY7 942 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 BDH2Q9BUT1 245 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 KLHL25Q9H0H3 589 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 ADAM7Q9H2U9 754 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 NTMQ9P121 344 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 PCDHGB7Q9Y5F8 929 aa5.66□□□□□ -1.5
R3HDM1-217ENST00000486532 C2orf71A6NGG8 1288 aa5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 HMGB1P1B2RPK0 211 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 MAFGO15525 162 aa5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 CBFA2T2O43439 604 aa5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 VAMP1P23763 118 aa5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 SOX9P48436 509 aa5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 GJA9P57773 515 aa5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 GLIPR1L2Q4G1C9 344 aa5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 NT5DC1Q5TFE4 455 aa5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 TMED8Q6PL24 325 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-217ENST00000486532 RUFY4Q6ZNE9 571 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms