RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 RANBP2P49792 3224 aaKnown RBP20.54■□□□□ 0.88
COL6A1-204ENST00000486023 PALM3A6NDB9 673 aaPredicted RBP20.54■□□□□ 0.88
COL6A1-204ENST00000486023 CDC45O75419 566 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 SLC34A2O95436 690 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 ASGR1P07306 291 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 MCM5P33992 734 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 GJA9P57773 515 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 GRM4Q14833 912 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 TAPT1Q6NXT6 567 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 MCF2L2Q86YR7 1114 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 PCSK9Q8NBP7 692 aaKnown RBP20.54■□□□□ 0.88
COL6A1-204ENST00000486023 IGDCC4Q8TDY8 1250 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 MPHOSPH6Q99547 160 aaKnown RBP20.54■□□□□ 0.88
COL6A1-204ENST00000486023 TSEN34Q9BSV6 310 aaKnown RBP20.54■□□□□ 0.88
COL6A1-204ENST00000486023 LRRC2Q9BYS8 371 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 PRO3102Q9H379 93 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 FRMPD3Q5JV73 1810 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 ALPK3Q96L96 1907 aa20.54■□□□□ 0.88
COL6A1-204ENST00000486023 TRIOBPQ9H2D6 2365 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 CFBP00751 764 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 NECTIN1Q15223 517 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 IQSEC1Q6DN90 963 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 TLK2Q86UE8 772 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 RAB11FIP4Q86YS3 637 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 GLT1D1Q96MS3 346 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 TAAR1Q96RJ0 339 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 PIGSQ96S52 555 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 AMNQ9BXJ7 453 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 VTA1Q9NP79 307 aa20.53■□□□□ 0.88
COL6A1-204ENST00000486023 MOXD2PA6NHM9 499 aa20.52■□□□□ 0.88
COL6A1-204ENST00000486023 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
COL6A1-204ENST00000486023 COL9A3Q14050 684 aaPredicted RBP20.52■□□□□ 0.88
COL6A1-204ENST00000486023 SH3RF1Q7Z6J0 888 aa20.52■□□□□ 0.88
COL6A1-204ENST00000486023 WDR11Q9BZH6 1224 aa20.52■□□□□ 0.88
COL6A1-204ENST00000486023 PCDHA1Q9Y5I3 950 aa20.52■□□□□ 0.88
COL6A1-204ENST00000486023 B4DLN1 442 aa20.51■□□□□ 0.87
COL6A1-204ENST00000486023 ZBTB5O15062 677 aa20.51■□□□□ 0.87
COL6A1-204ENST00000486023 MRPL12P52815 198 aaKnown RBP20.51■□□□□ 0.87
COL6A1-204ENST00000486023 TROAPQ12815 778 aa20.51■□□□□ 0.87
COL6A1-204ENST00000486023 FSCN1Q16658 493 aaKnown RBP20.51■□□□□ 0.87
COL6A1-204ENST00000486023 RNF20Q5VTR2 975 aa20.51■□□□□ 0.87
COL6A1-204ENST00000486023 CCSAPQ6IQ19 270 aaPredicted RBP20.51■□□□□ 0.87
COL6A1-204ENST00000486023 ZNF654Q8IZM8 581 aa20.51■□□□□ 0.87
COL6A1-204ENST00000486023 SYTL5Q8TDW5 730 aaPredicted RBP20.51■□□□□ 0.87
COL6A1-204ENST00000486023 UPF3AQ9H1J1 476 aaKnown RBP20.51■□□□□ 0.87
COL6A1-204ENST00000486023 LY9Q9HBG7 655 aa20.51■□□□□ 0.87
COL6A1-204ENST00000486023 GNEQ9Y223 722 aaKnown RBP20.51■□□□□ 0.87
COL6A1-204ENST00000486023 PPP1R11O60927 126 aaPredicted RBP20.5■□□□□ 0.87
COL6A1-204ENST00000486023 RXRAP19793 462 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 SNX17Q15036 470 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 CXCL17Q6UXB2 119 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 RGS22Q8NE09 1264 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 DNERQ8NFT8 737 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 CTCFLQ8NI51 663 aaPredicted RBP20.5■□□□□ 0.87
COL6A1-204ENST00000486023 MORC4Q8TE76 937 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 BADQ92934 168 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 RMDN3Q96TC7 470 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 TMEM39AQ9NV64 488 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 COL20A1Q9P218 1284 aa20.5■□□□□ 0.87
COL6A1-204ENST00000486023 TRIM43BA6NCK2 446 aa20.49■□□□□ 0.87
COL6A1-204ENST00000486023 CLTBP09497 229 aa20.49■□□□□ 0.87
COL6A1-204ENST00000486023 CST5P28325 142 aaPredicted RBP20.49■□□□□ 0.87
COL6A1-204ENST00000486023 BMP8BP34820 402 aa20.49■□□□□ 0.87
COL6A1-204ENST00000486023 SLC35G1Q2M3R5 365 aa20.49■□□□□ 0.87
COL6A1-204ENST00000486023 ARHGEF16Q5VV41 709 aa20.49■□□□□ 0.87
COL6A1-204ENST00000486023 SEPT14Q6ZU15 432 aa20.49■□□□□ 0.87
COL6A1-204ENST00000486023 CMTR1Q8N1G2 835 aaKnown RBP20.49■□□□□ 0.87
COL6A1-204ENST00000486023 TRIM43Q96BQ3 446 aaPredicted RBP20.49■□□□□ 0.87
COL6A1-204ENST00000486023 PDLIM7Q9NR12 457 aa20.49■□□□□ 0.87
COL6A1-204ENST00000486023 MCM3APO60318 1980 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 DCDC2CA8MYV0 355 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 SH2B2O14492 632 aaPredicted RBP20.48■□□□□ 0.87
COL6A1-204ENST00000486023 CTAGE5O15320 804 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 ZEB2O60315 1214 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 EIF2AK2P19525 551 aaKnown RBP20.48■□□□□ 0.87
COL6A1-204ENST00000486023 HOXA13P31271 388 aaPredicted RBP20.48■□□□□ 0.87
COL6A1-204ENST00000486023 C1orf53Q5VUE5 145 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 TDHQ8IZJ6 230 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 OR6J1Q8NGC5 347 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 NSUN6Q8TEA1 469 aaKnown RBP20.48■□□□□ 0.87
COL6A1-204ENST00000486023 TMEM87BQ96K49 555 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 TCEANC2Q96MN5 208 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 NEK1Q96PY6 1258 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 RIOX1Q9H6W3 641 aa20.48■□□□□ 0.87
COL6A1-204ENST00000486023 PNMA6FA0A0J9YX94 578 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 CYTH3O43739 400 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 MYL3P08590 195 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 TXNP10599 105 aaKnown RBP20.47■□□□□ 0.87
COL6A1-204ENST00000486023 RAG1P15918 1043 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 KIF5BP33176 963 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 PPP2R5BQ15173 497 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 DUSP28Q4G0W2 176 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 FCHSD1Q86WN1 690 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 TMTC2Q8N394 836 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 CCDC82Q8N4S0 544 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 COPS5Q92905 334 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 MTMR8Q96EF0 704 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 SLC12A7Q9Y666 1083 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 ELP1O95163 1332 aa20.47■□□□□ 0.87
COL6A1-204ENST00000486023 LOC102724159A0A0B4J2E5 919 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms