RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 CCDC88AQ3V6T2 1871 aa25.09■■□□□ 1.61
CLN5-202ENST00000485938 USP17L3A6NCW0 530 aa25.09■■□□□ 1.61
CLN5-202ENST00000485938 USP17L4A6NCW7 530 aa25.09■■□□□ 1.61
CLN5-202ENST00000485938 GGCXP38435 758 aa25.09■■□□□ 1.61
CLN5-202ENST00000485938 PPP1R2P41236 205 aa25.09■■□□□ 1.61
CLN5-202ENST00000485938 C2orf54Q08AI8 447 aa25.09■■□□□ 1.61
CLN5-202ENST00000485938 USP17L1Q7RTZ2 530 aa25.09■■□□□ 1.61
CLN5-202ENST00000485938 OR52Z1P0C646 297 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 HNRNPH3P31942 346 aaKnown RBP25.08■■□□□ 1.61
CLN5-202ENST00000485938 CCDC42Q96M95 316 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 SNX12Q9UMY4 172 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 LTBP4Q8N2S1 1624 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 AGPSO00116 658 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 SPA17Q15506 151 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 FKBP15Q5T1M5 1219 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 KRT26Q7Z3Y9 468 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 CREG2Q8IUH2 290 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 CRACR2AQ9BSW2 395 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 JRKLQ9Y4A0 524 aa25.08■■□□□ 1.61
CLN5-202ENST00000485938 PALM3A6NDB9 673 aaPredicted RBP25.07■■□□□ 1.6
CLN5-202ENST00000485938 PLEKP08567 350 aaPredicted RBP25.07■■□□□ 1.6
CLN5-202ENST00000485938 RPS8P62241 208 aaKnown RBP25.07■■□□□ 1.6
CLN5-202ENST00000485938 COBLL1Q53SF7 1204 aa25.07■■□□□ 1.6
CLN5-202ENST00000485938 MMGT1Q8N4V1 131 aa25.07■■□□□ 1.6
CLN5-202ENST00000485938 TRIM58Q8NG06 486 aa25.07■■□□□ 1.6
CLN5-202ENST00000485938 AENQ8WTP8 325 aaKnown RBP25.07■■□□□ 1.6
CLN5-202ENST00000485938 IQCDQ96DY2 449 aa25.07■■□□□ 1.6
CLN5-202ENST00000485938 PLAGL2Q9UPG8 496 aa25.07■■□□□ 1.6
CLN5-202ENST00000485938 SLC10A5Q5PT55 438 aa25.07■■□□□ 1.6
CLN5-202ENST00000485938 ZNF572Q7Z3I7 529 aaPredicted RBP25.07■■□□□ 1.6
CLN5-202ENST00000485938 JAG2Q9Y219 1238 aa25.07■■□□□ 1.6
CLN5-202ENST00000485938 ROBO3Q96MS0 1386 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 CCDC96Q2M329 555 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 KIAA0895Q8NCT3 520 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 SMCR8Q8TEV9 937 aaPredicted RBP25.06■■□□□ 1.6
CLN5-202ENST00000485938 ZMYND12Q9H0C1 365 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 SEMA6BQ9H3T3 888 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 RSPH14Q9UHP6 348 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 DZIP1Q86YF9 867 aaKnown RBP25.06■■□□□ 1.6
CLN5-202ENST00000485938 SH2D4AQ9H788 454 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 MKNK2Q9HBH9 465 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 ARHGAP20Q9P2F6 1191 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 CAPN6Q9Y6Q1 641 aa25.06■■□□□ 1.6
CLN5-202ENST00000485938 VGLL3A8MV65 326 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 PPFIA4O75335 1185 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 ITIH3Q06033 890 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 LETM2Q2VYF4 491 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 CNNM4Q6P4Q7 775 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 KRT25Q7Z3Z0 450 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 HPS3Q969F9 1004 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 MMTAG2Q9BU76 263 aaKnown RBP25.05■■□□□ 1.6
CLN5-202ENST00000485938 IFIH1Q9BYX4 1025 aaKnown RBP25.05■■□□□ 1.6
CLN5-202ENST00000485938 FAM184BQ9ULE4 1060 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 MTMR7Q9Y216 660 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 SIK3Q9Y2K2 1263 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 PCDHA13Q9Y5I0 950 aa25.05■■□□□ 1.6
CLN5-202ENST00000485938 CCNT1O60563 726 aaKnown RBP25.04■■□□□ 1.6
CLN5-202ENST00000485938 USO1O60763 962 aaKnown RBP25.04■■□□□ 1.6
CLN5-202ENST00000485938 TACC1O75410 805 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 AMPD3Q01432 767 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 DDB1Q16531 1140 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 CENPPQ6IPU0 288 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 SMARCC1Q92922 1105 aaPredicted RBP25.04■■□□□ 1.6
CLN5-202ENST00000485938 TMEM47Q9BQJ4 181 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 TSPY3P0CV98 308 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 TSPY8P0CW00 308 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 NONOQ15233 471 aaKnown RBP eCLIP25.04■■□□□ 1.6
CLN5-202ENST00000485938 CCDC70Q6NSX1 233 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 LZTS2Q9BRK4 669 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 CDCA7Q9BWT1 371 aaPredicted RBP25.04■■□□□ 1.6
CLN5-202ENST00000485938 ANKRD2Q9GZV1 360 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 MLXIPQ9HAP2 919 aa25.04■■□□□ 1.6
CLN5-202ENST00000485938 EPHB6O15197 1021 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 LCA5LO95447 670 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 PRLRP16471 622 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 BICDL1Q6ZP65 573 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 TXNRD3Q86VQ6 643 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 C2CD5Q86YS7 1000 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 AMOTL1Q8IY63 956 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 MARCH10Q8NA82 808 aaPredicted RBP25.03■■□□□ 1.6
CLN5-202ENST00000485938 SHOX2O60902 331 aaPredicted RBP25.03■■□□□ 1.6
CLN5-202ENST00000485938 GOLGA8HP0CJ92 632 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 NAPAP54920 295 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 VWA3BQ502W6 1294 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 SPTY2D1Q68D10 685 aaPredicted RBP25.03■■□□□ 1.6
CLN5-202ENST00000485938 SH3RF3Q8TEJ3 882 aaPredicted RBP25.03■■□□□ 1.6
CLN5-202ENST00000485938 RUBCNQ92622 972 aa25.03■■□□□ 1.6
CLN5-202ENST00000485938 GOLGA6BA6NDN3 693 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 KLRF2D3W0D1 207 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 TECP42680 631 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 KIF11P52732 1056 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 EZH2Q15910 746 aaKnown RBP25.02■■□□□ 1.6
CLN5-202ENST00000485938 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.02■■□□□ 1.6
CLN5-202ENST00000485938 HDAC7Q8WUI4 952 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 SPZ1Q9BXG8 430 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 COL5A3P25940 1745 aaPredicted RBP25.02■■□□□ 1.6
CLN5-202ENST00000485938 SLC44A5Q8NCS7 719 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 LRRC1Q9BTT6 524 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 NDST4Q9H3R1 872 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 PLEKHA4Q9H4M7 779 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms