RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 FMNL1O95466 1100 aaPredicted RBP6.74□□□□□ -1.33
CUX1-208ENST00000485792 SLC25A27O95847 323 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 INHAP05111 366 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 TOP1P11387 765 aaKnown RBP6.74□□□□□ -1.33
CUX1-208ENST00000485792 CPA1P15085 419 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 CCND3P30281 292 aaPredicted RBP6.74□□□□□ -1.33
CUX1-208ENST00000485792 SLC16A2P36021 539 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 OAZ1P54368 228 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 FUT2Q10981 343 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 MUM1L1Q5H9M0 696 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 KCTD1Q719H9 257 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 CHST3Q7LGC8 479 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 PLEKHH3Q7Z736 793 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 STAG2Q8N3U4 1231 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 COA7Q96BR5 231 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 TCEANC2Q96MN5 208 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 TANGO6Q9C0B7 1094 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 MROH8Q9H579 483 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 PPP4R2Q9NY27 417 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 FEM1BQ9UK73 627 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 MYH9P35579 1960 aaKnown RBP6.74□□□□□ -1.33
CUX1-208ENST00000485792 PFASO15067 1338 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 TNKSO95271 1327 aa6.74□□□□□ -1.33
CUX1-208ENST00000485792 TSPY2A6NKD2 308 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 CCDC85CA6NKD9 419 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 E7EWF7 191 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 SLC27A2O14975 620 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 EPB41L2O43491 1005 aaKnown RBP6.73□□□□□ -1.33
CUX1-208ENST00000485792 ADCY3O60266 1144 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 RANBP6O60518 1105 aaKnown RBP6.73□□□□□ -1.33
CUX1-208ENST00000485792 PGK2P07205 417 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 GJB1P08034 283 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 GOLGA8HP0CJ92 632 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 BMP3P12645 472 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 ERCC3P19447 782 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 STAT3P40763 770 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 GJA8P48165 433 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 CCNA1P78396 465 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 KCNC4Q03721 635 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 IMMTQ16891 758 aaKnown RBP6.73□□□□□ -1.33
CUX1-208ENST00000485792 SLC9C1Q4G0N8 1177 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 CCDC178Q5BJE1 867 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 OLFML2BQ68BL8 750 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 SLFN13Q68D06 897 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 TRMT44Q8IYL2 757 aaKnown RBP6.73□□□□□ -1.33
CUX1-208ENST00000485792 IGDCC4Q8TDY8 1250 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 DCAF4Q8WV16 495 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 SOCS4Q8WXH5 440 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 ESR2Q92731 530 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 MTMR8Q96EF0 704 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 CCDC136Q96JN2 1154 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 AGBL1Q96MI9 1066 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 SLF1Q9BQI6 1058 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 MYL10Q9BUA6 226 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 MAF1Q9H063 256 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 RANBP17Q9H2T7 1088 aaKnown RBP6.73□□□□□ -1.33
CUX1-208ENST00000485792 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 DIS3Q9Y2L1 958 aaKnown RBP6.73□□□□□ -1.33
CUX1-208ENST00000485792 PTPRSQ13332 1948 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 LOXHD1Q8IVV2 1947 aa6.73□□□□□ -1.33
CUX1-208ENST00000485792 MOXD2PA6NHM9 499 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 HMGCRP04035 888 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 CYBAP13498 195 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 MCCP23508 829 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 COPB2P35606 906 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 STAT2P52630 851 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 ATP2B2Q01814 1243 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 GHRHRQ02643 423 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 ZNF543Q08ER8 600 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 ST3GAL1Q11201 340 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 TROAPQ12815 778 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 SKIV2LQ15477 1246 aaKnown RBP6.72□□□□□ -1.33
CUX1-208ENST00000485792 ZNF792Q3KQV3 632 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 RRP12Q5JTH9 1297 aaKnown RBP6.72□□□□□ -1.33
CUX1-208ENST00000485792 MAMDC4Q6UXC1 1216 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 SLC30A10Q6XR72 485 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 FAM160B2Q86V87 743 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 RAB11FIP4Q86YS3 637 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 FBXL16Q8N461 479 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 RAET1EQ8TD07 263 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 CHURC1Q8WUH1 139 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 CLEC4DQ8WXI8 215 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 IL17RAQ96F46 866 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 ZSCAN10Q96SZ4 725 aaPredicted RBP6.72□□□□□ -1.33
CUX1-208ENST00000485792 MAP3K14Q99558 947 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 APBA2Q99767 749 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 TEX13BQ9BXU2 312 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 LRRC2Q9BYS8 371 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 KRT23Q9C075 422 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 LY9Q9HBG7 655 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 RAVER2Q9HCJ3 691 aaKnown RBP6.72□□□□□ -1.33
CUX1-208ENST00000485792 COL20A1Q9P218 1284 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 PRR12Q9ULL5 1215 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 TANC1Q9C0D5 1861 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 RPTORQ8N122 1335 aa6.72□□□□□ -1.33
CUX1-208ENST00000485792 EYSQ5T1H1 3165 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 PALM3A6NDB9 673 aaPredicted RBP6.71□□□□□ -1.34
CUX1-208ENST00000485792 MYADML2A6NDP7 307 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 TMEM232C9JQI7 657 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms