RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 HDXQ7Z353 690 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 KRT77Q7Z794 578 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 AFAP1L2Q8N4X5 818 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 ATG4CQ96DT6 458 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 IPO9Q96P70 1041 aaKnown RBP5.38□□□□□ -1.55
RTN4-213ENST00000485749 DHRS4Q9BTZ2 278 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 MRPL4Q9BYD3 311 aaKnown RBP5.38□□□□□ -1.55
RTN4-213ENST00000485749 SEMA6CQ9H3T2 930 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 PAK6Q9NQU5 681 aaPredicted RBP5.38□□□□□ -1.55
RTN4-213ENST00000485749 KRT82Q9NSB4 513 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 ZC3H7BQ9UGR2 993 aaKnown RBP5.38□□□□□ -1.55
RTN4-213ENST00000485749 EVLQ9UI08 416 aaPredicted RBP5.38□□□□□ -1.55
RTN4-213ENST00000485749 LTBP3Q9NS15 1303 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 TSPAN6O43657 245 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 MTA2O94776 668 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 NPTXRO95502 500 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 DLGAP3O95886 979 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 TPM2P07951 284 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ACRP10323 421 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 RBP3P10745 1247 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 RRM1P23921 792 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 HMGN5P82970 282 aaKnown RBP5.37□□□□□ -1.55
RTN4-213ENST00000485749 MAP2K1Q02750 393 aaPredicted RBP5.37□□□□□ -1.55
RTN4-213ENST00000485749 TTF1Q15361 905 aaPredicted RBP5.37□□□□□ -1.55
RTN4-213ENST00000485749 TMEM95Q3KNT9 176 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ALFQ53S48 1182 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 INO80DQ53TQ3 878 aaPredicted RBP5.37□□□□□ -1.55
RTN4-213ENST00000485749 CCDC93Q567U6 631 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 MAP1SQ66K74 1059 aaPredicted RBP5.37□□□□□ -1.55
RTN4-213ENST00000485749 OGFOD3Q6PK18 319 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 KSR2Q6VAB6 950 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ZNF765Q7L2R6 523 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 SCUBE1Q8IWY4 988 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 AHI1Q8N157 1196 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ATRIPQ8WXE1 791 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 GOLGA1Q92805 767 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ERP27Q96DN0 273 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 CCDC34Q96HJ3 373 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 FAM126AQ9BYI3 521 aaPredicted RBP5.37□□□□□ -1.55
RTN4-213ENST00000485749 NRSN2Q9GZP1 204 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ALDH8A1Q9H2A2 487 aaPredicted RBP5.37□□□□□ -1.55
RTN4-213ENST00000485749 ACSS3Q9H6R3 686 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 RAI14Q9P0K7 980 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 REV1Q9UBZ9 1251 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ADAM30Q9UKF2 790 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ACAD8Q9UKU7 415 aa5.37□□□□□ -1.55
RTN4-213ENST00000485749 ZNF214Q9UL59 606 aaPredicted RBP5.37□□□□□ -1.55
RTN4-213ENST00000485749 IRS4O14654 1257 aaPredicted RBP5.36□□□□□ -1.55
RTN4-213ENST00000485749 FARP2O94887 1054 aaPredicted RBP5.36□□□□□ -1.55
RTN4-213ENST00000485749 ATF3P18847 181 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 CALD1Q05682 793 aaKnown RBP5.36□□□□□ -1.55
RTN4-213ENST00000485749 WASHC5Q12768 1159 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 PDE3AQ14432 1141 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 C21orf62-AS1Q17RA5 79 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 LONRF1Q17RB8 773 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 C1QTNF12Q5T7M4 302 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 OVOS1Q6IE37 1185 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 KIAA1211LQ6NV74 962 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 CCDC73Q6ZRK6 1079 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 NECAB2Q7Z6G3 386 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 ANKRD13BQ86YJ7 626 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 IFNL3Q8IZI9 196 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 CPXCR1Q8N123 301 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 NDUFAF2Q8N183 169 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 PPM1KQ8N3J5 372 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 RIN3Q8TB24 985 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 KLHL6Q8WZ60 621 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 GATA6Q92908 595 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 DHRS1Q96LJ7 313 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 CAMKK2Q96RR4 588 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 SLC9A7Q96T83 725 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 SLC38A3Q99624 504 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 SEZ6LQ9BYH1 1024 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 ZNF700Q9H0M5 742 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 PIDD1Q9HB75 910 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 ZNF69Q9UC07 566 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 PCDHA4Q9UN74 947 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 ZNF652Q9Y2D9 606 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 MRPS23Q9Y3D9 190 aaKnown RBP5.36□□□□□ -1.55
RTN4-213ENST00000485749 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
RTN4-213ENST00000485749 PHLDB1Q86UU1 1377 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 TRAV20A0A0B4J274 112 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 E2F8A0AVK6 867 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 PES1O00541 588 aaKnown RBP5.35□□□□□ -1.55
RTN4-213ENST00000485749 FIBPO43427 364 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 RASGRP1O95267 797 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 EYA4O95677 639 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 SLFN14P0C7P3 912 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 KCNA2P16389 499 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 PLCG1P19174 1290 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 POU3F2P20265 443 aaPredicted RBP5.35□□□□□ -1.55
RTN4-213ENST00000485749 GUCY2FP51841 1108 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 ZNF131P52739 623 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 GEMIN4P57678 1058 aaKnown RBP5.35□□□□□ -1.55
RTN4-213ENST00000485749 CBX2Q14781 532 aaPredicted RBP5.35□□□□□ -1.55
RTN4-213ENST00000485749 SEPT2Q15019 361 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 TAF11Q15544 211 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 ZYXQ15942 572 aaKnown RBP5.35□□□□□ -1.55
RTN4-213ENST00000485749 GNPTABQ3T906 1256 aa5.35□□□□□ -1.55
RTN4-213ENST00000485749 FAM133BQ5BKY9 247 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms