RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TNFAIP2Q03169 654 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 BLOC1S2Q6QNY1 142 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 MICU3Q86XE3 530 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 FBXO16Q8IX29 292 aaPredicted RBP14.5□□□□□ -0.09
PTCD1-205ENST00000485746 CCDC82Q8N4S0 544 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 DNERQ8NFT8 737 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 TBC1D5Q92609 795 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 FERMT2Q96AC1 680 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 VTI1AQ96AJ9 217 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 VTA1Q9NP79 307 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 SNX14Q9Y5W7 946 aa14.5□□□□□ -0.09
PTCD1-205ENST00000485746 DDX49Q9Y6V7 483 aaKnown RBP14.5□□□□□ -0.09
PTCD1-205ENST00000485746 LOC102724159A0A0B4J2E5 919 aa14.49□□□□□ -0.09
PTCD1-205ENST00000485746 C6orf222P0C671 652 aaPredicted RBP14.49□□□□□ -0.09
PTCD1-205ENST00000485746 EXOSC10Q01780 885 aaKnown RBP14.49□□□□□ -0.09
PTCD1-205ENST00000485746 COL9A3Q14050 684 aaPredicted RBP14.49□□□□□ -0.09
PTCD1-205ENST00000485746 PWP2Q15269 919 aaKnown RBP14.49□□□□□ -0.09
PTCD1-205ENST00000485746 ARHGEF16Q5VV41 709 aa14.49□□□□□ -0.09
PTCD1-205ENST00000485746 IQSEC1Q6DN90 963 aa14.49□□□□□ -0.09
PTCD1-205ENST00000485746 FANCBQ8NB91 859 aa14.49□□□□□ -0.09
PTCD1-205ENST00000485746 MTMR8Q96EF0 704 aa14.49□□□□□ -0.09
PTCD1-205ENST00000485746 MAF1Q9H063 256 aa14.49□□□□□ -0.09
PTCD1-205ENST00000485746 AP5M1Q9H0R1 490 aa14.49□□□□□ -0.09
PTCD1-205ENST00000485746 KLF18A0A0U1RQI7 1052 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 GCOM1H8Y6P7 765 aaPredicted RBP14.48□□□□□ -0.09
PTCD1-205ENST00000485746 ZBTB43O43298 467 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 CYTH3O43739 400 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 PLEKHA8P1O95397 391 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 POLR2MP0CAP2 368 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 COL6A1P12109 1028 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 CPA1P15085 419 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 CASTP20810 708 aaKnown RBP14.48□□□□□ -0.09
PTCD1-205ENST00000485746 LRRC26Q2I0M4 334 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 Q6ZUG5 572 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 SGMS1Q86VZ5 419 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 CMTR1Q8N1G2 835 aaKnown RBP14.48□□□□□ -0.09
PTCD1-205ENST00000485746 SYTL5Q8TDW5 730 aaPredicted RBP14.48□□□□□ -0.09
PTCD1-205ENST00000485746 NSUN6Q8TEA1 469 aaKnown RBP14.48□□□□□ -0.09
PTCD1-205ENST00000485746 TAAR1Q96RJ0 339 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 RMDN3Q96TC7 470 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 SPZ1Q9BXG8 430 aa14.48□□□□□ -0.09
PTCD1-205ENST00000485746 RBM28Q9NW13 759 aaKnown RBP14.48□□□□□ -0.09
PTCD1-205ENST00000485746 ASTN1O14525 1302 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 GOLGA8AA7E2F4 631 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 GOLGA8BA8MQT2 603 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 DYNC1LI2O43237 492 aaPredicted RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 EPB41L2O43491 1005 aaKnown RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 ZEB2O60315 1214 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 EIF5BO60841 1220 aaKnown RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 PPP1R11O60927 126 aaPredicted RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 SMARCA1P28370 1054 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 KCNA10Q16322 511 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 RTN1Q16799 776 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 GNASQ5JWF2 1037 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 APOA5Q6Q788 366 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 SRBD1Q8N5C6 995 aaKnown RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 PCSK9Q8NBP7 692 aaKnown RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 KCNB2Q92953 911 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 CUL5Q93034 780 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 TSEN34Q9BSV6 310 aaKnown RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 USP26Q9BXU7 913 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 PDGFCQ9NRA1 345 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 ZMYND8Q9ULU4 1186 aaPredicted RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 ATP11BQ9Y2G3 1177 aa14.47□□□□□ -0.09
PTCD1-205ENST00000485746 ZNFX1Q9P2E3 1918 aaKnown RBP14.47□□□□□ -0.09
PTCD1-205ENST00000485746 SYNRGQ9UMZ2 1314 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 HOXA13P31271 388 aaPredicted RBP14.46□□□□□ -0.09
PTCD1-205ENST00000485746 STXBP2Q15833 593 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 SLC35G1Q2M3R5 365 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 TAPT1Q6NXT6 567 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 SLC39A5Q6ZMH5 540 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 FCHSD1Q86WN1 690 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 SAMD3Q8N6K7 520 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 MORC4Q8TE76 937 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 IWS1Q96ST2 819 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 WDR11Q9BZH6 1224 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 KATNBL1Q9H079 304 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 MAP3K20Q9NYL2 800 aaKnown RBP14.46□□□□□ -0.09
PTCD1-205ENST00000485746 PRKAG2Q9UGJ0 569 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 BRPF3Q9ULD4 1205 aa14.46□□□□□ -0.09
PTCD1-205ENST00000485746 ADAMTS4O75173 837 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 MYCLP12524 364 aaPredicted RBP14.45□□□□□ -0.1
PTCD1-205ENST00000485746 SMPD1P17405 629 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 SYN1P17600 705 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 EIF2AK2P19525 551 aaKnown RBP14.45□□□□□ -0.1
PTCD1-205ENST00000485746 RPS6KB1P23443 525 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 METAP2P50579 478 aaKnown RBP eCLIP14.45□□□□□ -0.1
PTCD1-205ENST00000485746 HSD17B4P51659 736 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 GJA9P57773 515 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 RTP1P59025 263 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 APOBRQ0VD83 1088 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 SEPT14Q6ZU15 432 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 TMTC3Q6ZXV5 915 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 TLK2Q86UE8 772 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 BRF1Q92994 677 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 STARD7Q9NQZ5 370 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 COL20A1Q9P218 1284 aa14.45□□□□□ -0.1
PTCD1-205ENST00000485746 PHF24Q9UPV7 400 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms