RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 ADAM23O75077 832 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 CPP00450 1065 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 POLR3DP05423 398 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 SNRPA1P09661 255 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 IFIT1P09914 478 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 ARAFP10398 606 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 BMP6P22004 513 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 ADH6P28332 368 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 AARSP49588 968 aaKnown RBP eCLIP5.32□□□□□ -1.565e-11■□□□□ 10.3
SMARCC1-206ENST00000485737 PLCD1P51178 756 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 RCAN1P53805 252 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 PCBP4P57723 403 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 PDE4BQ07343 736 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 AIMP1Q12904 312 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 PNOCQ13519 176 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 NR1I3Q14994 352 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 TTC39AQ5SRH9 613 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 SAMD5Q5TGI4 173 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 KRT40Q6A162 431 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 TTLL5Q6EMB2 1281 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 OTUD7BQ6GQQ9 843 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 APTXQ7Z2E3 356 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 HDXQ7Z353 690 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 RALYLQ86SE5 291 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 SGMS1Q86VZ5 419 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 ALDH16A1Q8IZ83 802 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 THEMISQ8N1K5 641 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 SPATA20Q8TB22 786 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 FAM71BQ8TC56 605 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 APPBP2Q92624 585 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 OSBP2Q969R2 916 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 SYTL4Q96C24 671 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 CEP63Q96MT8 703 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 VIPAS39Q9H9C1 493 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 MRPL44Q9H9J2 332 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 MED4Q9NPJ6 270 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 FANCLQ9NW38 375 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 ADAM21Q9UKJ8 722 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 MAN1B1Q9UKM7 699 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 KCNH3Q9ULD8 1083 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 ANGEL1Q9UNK9 670 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 RRP15Q9Y3B9 282 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 PCDHA5Q9Y5H7 936 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 KCPQ6ZWJ8 1503 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 COL18A1P39060 1754 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 DISP2A7MBM2 1401 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 TNS2Q63HR2 1409 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 MYO5AQ9Y4I1 1855 aaKnown RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 A0A087WZG4 1122 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 A0A1B0GUL7 405 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 AKR1B15C9JRZ8 316 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 KIF5CO60282 957 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 MFAP3LO75121 409 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 GCP02774 474 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 PHKG2P15735 406 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CDC27P30260 824 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 NOP2P46087 812 aaKnown RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 METAP2P50579 478 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 HIRAP54198 1017 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 AMPD2Q01433 879 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 FMR1Q06787 632 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 PDE4CQ08493 712 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 SF3B2Q13435 895 aaKnown RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 POSTNQ15063 836 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 NTRK3Q16288 839 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 C1orf53Q5VUE5 145 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CDKAL1Q5VV42 579 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 WDR93Q6P2C0 686 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CPLX2Q6PUV4 134 aaKnown RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 LMBR1LQ6UX01 489 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 LEKR1Q6ZMV7 388 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 SLCO4C1Q6ZQN7 724 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 RASGRP2Q7LDG7 609 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CHST3Q7LGC8 479 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CNGA4Q8IV77 575 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 FOXP4Q8IVH2 680 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 STK11IPQ8N1F8 1099 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CNNM3Q8NE01 707 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CCDC12Q8WUD4 166 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 VTI1AQ96AJ9 217 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CCDC34Q96HJ3 373 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 ZNF496Q96IT1 587 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 TMEM87BQ96K49 555 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 ZNF512BQ96KM6 892 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 PNKPQ96T60 521 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 ALG1Q9BT22 464 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 MTA3Q9BTC8 594 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 C2orf49Q9BVC5 232 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 TEX13AQ9BXU3 409 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 ACBD3Q9H3P7 528 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 CWC25Q9NXE8 425 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 ANKIB1Q9P2G1 1089 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 FBXO2Q9UK22 296 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 HCN2Q9UL51 889 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 L1RE1Q9UN81 338 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 TTF2Q9UNY4 1162 aaKnown RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 NFE2L3Q9Y4A8 694 aa5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 GPC6Q9Y625 555 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-206ENST00000485737 ARAP2Q8WZ64 1704 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms