RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 HEATR3Q7Z4Q2 680 aa9.53□□□□□ -0.88
SF3A1-208ENST00000485618 ZNF467Q7Z7K2 595 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-208ENST00000485618 BICD2Q8TD16 824 aa9.53□□□□□ -0.88
SF3A1-208ENST00000485618 PIBF1Q8WXW3 757 aa9.53□□□□□ -0.88
SF3A1-208ENST00000485618 PIGSQ96S52 555 aa9.53□□□□□ -0.88
SF3A1-208ENST00000485618 RNF26Q9BY78 433 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-208ENST00000485618 PSTPIP2Q9H939 334 aa9.53□□□□□ -0.88
SF3A1-208ENST00000485618 EHMT1Q9H9B1 1298 aa9.53□□□□□ -0.88
SF3A1-208ENST00000485618 GJD2Q9UKL4 321 aa9.53□□□□□ -0.88
SF3A1-208ENST00000485618 ZNF536O15090 1300 aa9.53□□□□□ -0.88
SF3A1-208ENST00000485618 NID2Q14112 1375 aa9.52□□□□□ -0.88
SF3A1-208ENST00000485618 A0A0C4DFX4 3053 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 PLEKHA8P1O95397 391 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 DEXIO95424 95 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 SCG2P13521 617 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 GNA11P29992 359 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 TRIM29Q14134 588 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 OLFML2BQ68BL8 750 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 RASGRP2Q7LDG7 609 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 RAB11FIP4Q86YS3 637 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 CCDC148Q8NFR7 591 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 DNERQ8NFT8 737 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 LLPHQ9BRT6 129 aaKnown RBP9.52□□□□□ -0.89
SF3A1-208ENST00000485618 SLC26A6Q9BXS9 759 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 CPVLQ9H3G5 476 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 SH3GLB2Q9NR46 395 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 CYP39A1Q9NYL5 469 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 NRBP1Q9UHY1 535 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 TPCN1Q9ULQ1 816 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 RIPK3Q9Y572 518 aa9.52□□□□□ -0.89
SF3A1-208ENST00000485618 CYTH3O43739 400 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 EVI5O60447 810 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 SGPL1O95470 568 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 CFBP00751 764 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 FOSP01100 380 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-208ENST00000485618 TFRCP02786 760 aaKnown RBP9.51□□□□□ -0.89
SF3A1-208ENST00000485618 HMGCRP04035 888 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 CALML3P27482 149 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 NAPAP54920 295 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 HMGN5P82970 282 aaKnown RBP9.51□□□□□ -0.89
SF3A1-208ENST00000485618 BAATQ14032 418 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-208ENST00000485618 PFKFB3Q16875 520 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-208ENST00000485618 GALNT17Q6IS24 598 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 SMARCC2Q8TAQ2 1214 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 NSUN6Q8TEA1 469 aaKnown RBP9.51□□□□□ -0.89
SF3A1-208ENST00000485618 USP6NLQ92738 828 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 GTF3C6Q969F1 213 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 DEFB118Q96PH6 123 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 IWS1Q96ST2 819 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 C6orf50Q9HD87 102 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 A1CFQ9NQ94 594 aaKnown RBP9.51□□□□□ -0.89
SF3A1-208ENST00000485618 BARHL2Q9NY43 387 aa9.51□□□□□ -0.89
SF3A1-208ENST00000485618 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-208ENST00000485618 RLFQ13129 1914 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 BAZ2BQ9UIF8 2168 aaKnown RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 SPDYE3A6NKU9 549 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 MSCO60682 206 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 PEX10O60683 326 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 CDC27P30260 824 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 ADCY7P51828 1080 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 RPS6P62753 249 aaKnown RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 COL9A3Q14050 684 aaPredicted RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 ZNF792Q3KQV3 632 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 ARHGEF16Q5VV41 709 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 NOL8Q76FK4 1167 aaKnown RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 CMTR1Q8N1G2 835 aaKnown RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 FAM184AQ8NB25 1140 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 CLEC4DQ8WXI8 215 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 RMDN3Q96TC7 470 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 KIF2CQ99661 725 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 PRO3102Q9H379 93 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 NCOA5Q9HCD5 579 aaKnown RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 BRMS1Q9HCU9 246 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 FAM217BQ9NTX9 383 aaPredicted RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 ORC3Q9UBD5 711 aaPredicted RBP9.5□□□□□ -0.89
SF3A1-208ENST00000485618 CUL9Q8IWT3 2517 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 SYNGAP1Q96PV0 1343 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 TRIOBPQ9H2D6 2365 aa9.5□□□□□ -0.89
SF3A1-208ENST00000485618 DNAJC25-GNG10A0A024R161 153 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 SMCO2A6NFE2 343 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 NFIBO00712 420 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 COBLO75128 1261 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 PGK2P07205 417 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 NLRP5P59047 1200 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 PDE4DQ08499 809 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 FUT2Q10981 343 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 SCRN1Q12765 414 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 SAFBQ15424 915 aaKnown RBP eCLIP9.49□□□□□ -0.89
SF3A1-208ENST00000485618 ME3Q16798 604 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 MUM1L1Q5H9M0 696 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 XRRA1Q6P2D8 792 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 MAMDC4Q6UXC1 1216 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 PHKBQ93100 1093 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms