RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 FBXO40Q9UH90 709 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 LIMCH1Q9UPQ0 1083 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 ABCB11O95342 1321 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 DNAJC25-GNG10A0A024R161 153 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 SOWAHBA6NEL2 793 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 POTEB2H3BUK9 544 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 ST18O60284 1047 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 COPB2P35606 906 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 UBE2SQ16763 222 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 TKFCQ3LXA3 575 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 ANO1Q5XXA6 986 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 EEPD1Q7L9B9 569 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 FCHSD1Q86WN1 690 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 VPS54Q9P1Q0 977 aa13.71□□□□□ -0.21
APTX-227ENST00000485479 IFNAR1P17181 557 aa13.71□□□□□ -0.22
APTX-227ENST00000485479 PTGS1P23219 599 aa13.71□□□□□ -0.22
APTX-227ENST00000485479 NAPAP54920 295 aa13.71□□□□□ -0.22
APTX-227ENST00000485479 IRF5Q13568 498 aa13.71□□□□□ -0.22
APTX-227ENST00000485479 ABRAQ8N0Z2 381 aa13.71□□□□□ -0.22
APTX-227ENST00000485479 PGBD1Q96JS3 809 aa13.71□□□□□ -0.22
APTX-227ENST00000485479 MRPL11Q9Y3B7 192 aaKnown RBP13.71□□□□□ -0.22
APTX-227ENST00000485479 STXBP3O00186 592 aa13.7□□□□□ -0.22
APTX-227ENST00000485479 SCG2P13521 617 aa13.7□□□□□ -0.22
APTX-227ENST00000485479 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
APTX-227ENST00000485479 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
APTX-227ENST00000485479 PFKFB3Q16875 520 aaPredicted RBP13.7□□□□□ -0.22
APTX-227ENST00000485479 FAM133AQ8N9E0 248 aa13.7□□□□□ -0.22
APTX-227ENST00000485479 LENG1Q96BZ8 264 aaPredicted RBP13.7□□□□□ -0.22
APTX-227ENST00000485479 TAAR1Q96RJ0 339 aa13.7□□□□□ -0.22
APTX-227ENST00000485479 PRPF3O43395 683 aaKnown RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 HOXC6P09630 235 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 CCND3P30281 292 aaPredicted RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 AKAP17AQ02040 695 aaKnown RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 CACNB2Q08289 660 aaPredicted RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 SSRP1Q08945 709 aaKnown RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 PKN2Q16513 984 aaKnown RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 SLAIN1Q8ND83 568 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 NSUN7Q8NE18 718 aaKnown RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 SYTL5Q8TDW5 730 aaPredicted RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 ABHD8Q96I13 439 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 PFASO15067 1338 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 HMGCRP04035 888 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 PRMT2P55345 433 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 PPP2R5BQ15173 497 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 ARMCX2Q7L311 632 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 TRPV1Q8NER1 839 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 RASGRP4Q8TDF6 673 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 TMX3Q96JJ7 454 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 RNF26Q9BY78 433 aaPredicted RBP13.69□□□□□ -0.22
APTX-227ENST00000485479 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
APTX-227ENST00000485479 CAPN15O75808 1086 aa13.68□□□□□ -0.22
APTX-227ENST00000485479 FDPSP14324 419 aaKnown RBP13.68□□□□□ -0.22
APTX-227ENST00000485479 CNGA1P29973 690 aa13.68□□□□□ -0.22
APTX-227ENST00000485479 ALDH5A1P51649 535 aaPredicted RBP13.68□□□□□ -0.22
APTX-227ENST00000485479 FBXO16Q8IX29 292 aaPredicted RBP13.68□□□□□ -0.22
APTX-227ENST00000485479 TRIM22Q8IYM9 498 aa13.68□□□□□ -0.22
APTX-227ENST00000485479 IL31RAQ8NI17 732 aa13.68□□□□□ -0.22
APTX-227ENST00000485479 PXYLP1Q8TE99 480 aa13.68□□□□□ -0.22
APTX-227ENST00000485479 ZNF333Q96JL9 665 aa13.68□□□□□ -0.22
APTX-227ENST00000485479 TINF2Q9BSI4 451 aa13.68□□□□□ -0.22
APTX-227ENST00000485479 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
APTX-227ENST00000485479 CCDC85CA6NKD9 419 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 MEIS2O14770 477 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 SNAI1O95863 264 aaPredicted RBP13.67□□□□□ -0.22
APTX-227ENST00000485479 HSD17B4P51659 736 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 TMEM63BQ5T3F8 832 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
APTX-227ENST00000485479 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
APTX-227ENST00000485479 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
APTX-227ENST00000485479 KCNJ14Q9UNX9 436 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
APTX-227ENST00000485479 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 GCOM1H8Y6P7 765 aaPredicted RBP13.67□□□□□ -0.22
APTX-227ENST00000485479 POLR2MP0CAP2 368 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 SOX10P56693 466 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 CPLX2Q6PUV4 134 aaKnown RBP13.67□□□□□ -0.22
APTX-227ENST00000485479 MCF2L2Q86YR7 1114 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 RNF208Q9H0X6 261 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 LRRC37A2A6NM11 1700 aa13.67□□□□□ -0.22
APTX-227ENST00000485479 ADCY6O43306 1168 aa13.66□□□□□ -0.22
APTX-227ENST00000485479 DEXIO95424 95 aa13.66□□□□□ -0.22
APTX-227ENST00000485479 CCL5P13501 91 aa13.66□□□□□ -0.22
APTX-227ENST00000485479 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
APTX-227ENST00000485479 PDGFCQ9NRA1 345 aa13.66□□□□□ -0.22
APTX-227ENST00000485479 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
APTX-227ENST00000485479 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 IGHA2P01877 340 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 MYCLP12524 364 aaPredicted RBP13.65□□□□□ -0.22
APTX-227ENST00000485479 ADCY7P51828 1080 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
APTX-227ENST00000485479 GUCY1B3Q02153 619 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
APTX-227ENST00000485479 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms