RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 SMCHD1A6NHR9 2005 aa24.99■■□□□ 1.59
NECAB3-211ENST00000485399 COPB2P35606 906 aa24.98■■□□□ 1.59
NECAB3-211ENST00000485399 NPY5RQ15761 445 aa24.98■■□□□ 1.59
NECAB3-211ENST00000485399 RIOX2Q8IUF8 465 aa24.98■■□□□ 1.59
NECAB3-211ENST00000485399 TRERF1Q96PN7 1200 aa24.98■■□□□ 1.59
NECAB3-211ENST00000485399 FOXP1Q9H334 677 aaPredicted RBP24.98■■□□□ 1.59
NECAB3-211ENST00000485399 ZSCAN16Q9H4T2 348 aaPredicted RBP24.98■■□□□ 1.59
NECAB3-211ENST00000485399 BTBD18B2RXH4 712 aa24.97■■□□□ 1.59
NECAB3-211ENST00000485399 SLC25A27O95847 323 aa24.97■■□□□ 1.59
NECAB3-211ENST00000485399 F13A1P00488 732 aa24.97■■□□□ 1.59
NECAB3-211ENST00000485399 TAL1P17542 331 aaPredicted RBP24.97■■□□□ 1.59
NECAB3-211ENST00000485399 MCF2L2Q86YR7 1114 aa24.97■■□□□ 1.59
NECAB3-211ENST00000485399 SAMD3Q8N6K7 520 aa24.97■■□□□ 1.59
NECAB3-211ENST00000485399 TLR2O60603 784 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 U2AF2P26368 475 aaKnown RBP eCLIP24.96■■□□□ 1.595e-10■□□□□ 11.1
NECAB3-211ENST00000485399 ERVK-9P63128 1117 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 ERVK-24P63145 666 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 FOXD4L5Q5VV16 416 aaPredicted RBP24.96■■□□□ 1.59
NECAB3-211ENST00000485399 CHST13Q8NET6 341 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 GPRC5AQ8NFJ5 357 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 FOXD4L4Q8WXT5 416 aaPredicted RBP24.96■■□□□ 1.59
NECAB3-211ENST00000485399 ZNF333Q96JL9 665 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 MAF1Q9H063 256 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 TXNRD2Q9NNW7 524 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 RNF146Q9NTX7 359 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 MORF4L1Q9UBU8 362 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 RIPK3Q9Y572 518 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 PTCH2Q9Y6C5 1203 aa24.96■■□□□ 1.59
NECAB3-211ENST00000485399 RESTQ13127 1097 aa24.95■■□□□ 1.59
NECAB3-211ENST00000485399 MCTP2Q6DN12 878 aa24.95■■□□□ 1.59
NECAB3-211ENST00000485399 BRAPQ7Z569 592 aa24.95■■□□□ 1.59
NECAB3-211ENST00000485399 FERMT3Q86UX7 667 aa24.95■■□□□ 1.59
NECAB3-211ENST00000485399 REXO1Q8N1G1 1221 aaKnown RBP24.95■■□□□ 1.59
NECAB3-211ENST00000485399 OXER1Q8TDS5 423 aa24.95■■□□□ 1.59
NECAB3-211ENST00000485399 CLEC4DQ8WXI8 215 aa24.95■■□□□ 1.59
NECAB3-211ENST00000485399 HOMER2Q9NSB8 354 aa24.95■■□□□ 1.59
NECAB3-211ENST00000485399 FBXO40Q9UH90 709 aa24.95■■□□□ 1.59
NECAB3-211ENST00000485399 OPLAHO14841 1288 aa24.94■■□□□ 1.58
NECAB3-211ENST00000485399 CCNA1P78396 465 aa24.94■■□□□ 1.58
NECAB3-211ENST00000485399 ANKRD13CQ8N6S4 541 aa24.94■■□□□ 1.58
NECAB3-211ENST00000485399 MOV10L1Q9BXT6 1211 aaKnown RBP24.94■■□□□ 1.58
NECAB3-211ENST00000485399 ARHGAP39Q9C0H5 1083 aa24.94■■□□□ 1.58
NECAB3-211ENST00000485399 ACAD9Q9H845 621 aa24.94■■□□□ 1.58
NECAB3-211ENST00000485399 MAP3K20Q9NYL2 800 aaKnown RBP24.94■■□□□ 1.58
NECAB3-211ENST00000485399 ATP6V1DQ9Y5K8 247 aa24.94■■□□□ 1.58
NECAB3-211ENST00000485399 ADGRA2Q96PE1 1338 aa24.94■■□□□ 1.58
NECAB3-211ENST00000485399 GCOM1H8Y6P7 765 aaPredicted RBP24.93■■□□□ 1.58
NECAB3-211ENST00000485399 M0R2N6 131 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 PIK3CDO00329 1044 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 PEX10O60683 326 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 POLR2MP0CAP2 368 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 EN2P19622 333 aaPredicted RBP24.93■■□□□ 1.58
NECAB3-211ENST00000485399 NR5A1Q13285 461 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 Q3C1V9 767 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 MUM1L1Q5H9M0 696 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 NOSTRINQ8IVI9 506 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 SHCBP1Q8NEM2 672 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 PCDHA6Q9UN73 950 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 PCDHA8Q9Y5H6 950 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 KIF28PB7ZC32 967 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 NFIBO00712 420 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 MEIS2O14770 477 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 CFBP00751 764 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 CLK2P49760 499 aaKnown RBP24.93■■□□□ 1.58
NECAB3-211ENST00000485399 LACTBP83111 547 aaPredicted RBP24.93■■□□□ 1.58
NECAB3-211ENST00000485399 GHRHRQ02643 423 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 ARHGEF6Q15052 776 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 FAM110CQ1W6H9 321 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 NCAPG2Q86XI2 1143 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 TNFRSF25Q93038 417 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 MROH8Q9H579 483 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 PCDH10Q9P2E7 1040 aa24.93■■□□□ 1.58
NECAB3-211ENST00000485399 BIN2Q9UBW5 565 aaPredicted RBP24.93■■□□□ 1.58
NECAB3-211ENST00000485399 UBE2SQ16763 222 aa24.92■■□□□ 1.58
NECAB3-211ENST00000485399 KRT25Q7Z3Z0 450 aa24.92■■□□□ 1.58
NECAB3-211ENST00000485399 CCDC194A0A1B0GVG4 234 aa24.91■■□□□ 1.58
NECAB3-211ENST00000485399 ADAMTS3O15072 1205 aa24.91■■□□□ 1.58
NECAB3-211ENST00000485399 FOSP01100 380 aaPredicted RBP24.91■■□□□ 1.58
NECAB3-211ENST00000485399 ERCC3P19447 782 aa24.91■■□□□ 1.58
NECAB3-211ENST00000485399 HSD17B4P51659 736 aa24.91■■□□□ 1.58
NECAB3-211ENST00000485399 AP3B2Q13367 1082 aa24.91■■□□□ 1.58
NECAB3-211ENST00000485399 SLC9C1Q4G0N8 1177 aa24.91■■□□□ 1.58
NECAB3-211ENST00000485399 JAKMIP3Q5VZ66 844 aa24.91■■□□□ 1.58
NECAB3-211ENST00000485399 USP17L6PQ6QN14 398 aa24.91■■□□□ 1.58
NECAB3-211ENST00000485399 BCRP11274 1271 aa24.9■■□□□ 1.58
NECAB3-211ENST00000485399 C17orf99Q6UX52 265 aa24.9■■□□□ 1.58
NECAB3-211ENST00000485399 RNF207Q6ZRF8 634 aa24.9■■□□□ 1.58
NECAB3-211ENST00000485399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.9■■□□□ 1.585e-7■■■■■ 32
NECAB3-211ENST00000485399 RASGRP4Q8TDF6 673 aa24.9■■□□□ 1.58
NECAB3-211ENST00000485399 TBC1D5Q92609 795 aa24.9■■□□□ 1.58
NECAB3-211ENST00000485399 CPA4Q9UI42 421 aa24.9■■□□□ 1.58
NECAB3-211ENST00000485399 NSMFQ6X4W1 530 aa24.89■■□□□ 1.57
NECAB3-211ENST00000485399 CCAR1Q8IX12 1150 aaKnown RBP24.89■■□□□ 1.57
NECAB3-211ENST00000485399 TMEM260Q9NX78 707 aa24.89■■□□□ 1.57
NECAB3-211ENST00000485399 MYH15Q9Y2K3 1946 aa24.88■■□□□ 1.57
NECAB3-211ENST00000485399 SPDYE3A6NKU9 549 aa24.88■■□□□ 1.57
NECAB3-211ENST00000485399 CTGFP29279 349 aa24.88■■□□□ 1.57
NECAB3-211ENST00000485399 HOXA13P31271 388 aaPredicted RBP24.88■■□□□ 1.57
NECAB3-211ENST00000485399 NONOQ15233 471 aaKnown RBP eCLIP24.88■■□□□ 1.576e-7■■■■□ 23.9
NECAB3-211ENST00000485399 PIK3AP1Q6ZUJ8 805 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms