RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ANKLE1Q8NAG6 615 aa20.6■□□□□ 0.89
SREBF1-213ENST00000485080 DNERQ8NFT8 737 aa20.6■□□□□ 0.89
SREBF1-213ENST00000485080 FAM217BQ9NTX9 383 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-213ENST00000485080 ASTN1O14525 1302 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 LCTP09848 1927 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 OPLAHO14841 1288 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 ZNF865P0CJ78 1059 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-213ENST00000485080 APOBRQ0VD83 1088 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 TOB2Q14106 344 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-213ENST00000485080 UBE2Q1Q7Z7E8 422 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 HOMER1Q86YM7 354 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 CCDC144CPQ8IYA2 1237 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 ABHD16BQ9H3Z7 469 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-213ENST00000485080 DDX20Q9UHI6 824 aaKnown RBP20.59■□□□□ 0.89
SREBF1-213ENST00000485080 CNPY2Q9Y2B0 182 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 GTF3C3Q9Y5Q9 886 aa20.59■□□□□ 0.89
SREBF1-213ENST00000485080 PTPDC1A2A3K4 754 aa20.58■□□□□ 0.89
SREBF1-213ENST00000485080 GOLGA8AA7E2F4 631 aa20.58■□□□□ 0.89
SREBF1-213ENST00000485080 GOLGA8BA8MQT2 603 aa20.58■□□□□ 0.89
SREBF1-213ENST00000485080 SLC30A10Q6XR72 485 aa20.58■□□□□ 0.89
SREBF1-213ENST00000485080 ARMCX2Q7L311 632 aa20.58■□□□□ 0.89
SREBF1-213ENST00000485080 ZNF274Q96GC6 653 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-213ENST00000485080 UPF3BQ9BZI7 483 aaKnown RBP20.58■□□□□ 0.89
SREBF1-213ENST00000485080 KATNBL1Q9H079 304 aa20.58■□□□□ 0.89
SREBF1-213ENST00000485080 SEC63Q9UGP8 760 aaKnown RBP20.58■□□□□ 0.89
SREBF1-213ENST00000485080 MCM3APO60318 1980 aa20.57■□□□□ 0.88
SREBF1-213ENST00000485080 EDNRBP24530 442 aa20.57■□□□□ 0.88
SREBF1-213ENST00000485080 METAP2P50579 478 aaKnown RBP eCLIP20.57■□□□□ 0.882e-6■□□□□ 9
SREBF1-213ENST00000485080 HSD17B4P51659 736 aa20.57■□□□□ 0.88
SREBF1-213ENST00000485080 PRAMEF19Q5SWL8 479 aa20.57■□□□□ 0.88
SREBF1-213ENST00000485080 RAB11FIP4Q86YS3 637 aa20.57■□□□□ 0.88
SREBF1-213ENST00000485080 TEX2Q8IWB9 1127 aa20.57■□□□□ 0.88
SREBF1-213ENST00000485080 SYTL5Q8TDW5 730 aaPredicted RBP20.57■□□□□ 0.88
SREBF1-213ENST00000485080 PDRG1Q9NUG6 133 aa20.57■□□□□ 0.88
SREBF1-213ENST00000485080 CNTNAP5Q8WYK1 1306 aa20.56■□□□□ 0.88
SREBF1-213ENST00000485080 TFRCP02786 760 aaKnown RBP20.56■□□□□ 0.88
SREBF1-213ENST00000485080 CALML3P27482 149 aa20.56■□□□□ 0.88
SREBF1-213ENST00000485080 PDIA3P30101 505 aaKnown RBP20.56■□□□□ 0.88
SREBF1-213ENST00000485080 CDC27P30260 824 aa20.56■□□□□ 0.88
SREBF1-213ENST00000485080 ALDH5A1P51649 535 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-213ENST00000485080 ACVR2BQ13705 512 aa20.56■□□□□ 0.88
SREBF1-213ENST00000485080 CMTR1Q8N1G2 835 aaKnown RBP20.56■□□□□ 0.88
SREBF1-213ENST00000485080 TBC1D5Q92609 795 aa20.56■□□□□ 0.88
SREBF1-213ENST00000485080 TNRC18O15417 2968 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-213ENST00000485080 AKR1A1P14550 325 aa20.55■□□□□ 0.88
SREBF1-213ENST00000485080 CNGA1P29973 690 aa20.55■□□□□ 0.88
SREBF1-213ENST00000485080 PURBQ96QR8 312 aaKnown RBP20.55■□□□□ 0.88
SREBF1-213ENST00000485080 MPHOSPH6Q99547 160 aaKnown RBP20.55■□□□□ 0.88
SREBF1-213ENST00000485080 B4DLN1 442 aa20.54■□□□□ 0.88
SREBF1-213ENST00000485080 ADD1P35611 737 aaKnown RBP20.54■□□□□ 0.88
SREBF1-213ENST00000485080 MNX1P50219 401 aaPredicted RBP20.54■□□□□ 0.88
SREBF1-213ENST00000485080 MRPL12P52815 198 aaKnown RBP20.54■□□□□ 0.88
SREBF1-213ENST00000485080 IWS1Q96ST2 819 aa20.54■□□□□ 0.88
SREBF1-213ENST00000485080 VTA1Q9NP79 307 aa20.54■□□□□ 0.88
SREBF1-213ENST00000485080 COL20A1Q9P218 1284 aa20.54■□□□□ 0.88
SREBF1-213ENST00000485080 RBM27Q9P2N5 1060 aaKnown RBP20.54■□□□□ 0.88
SREBF1-213ENST00000485080 FAM184BQ9ULE4 1060 aa20.54■□□□□ 0.88
SREBF1-213ENST00000485080 hCG_1984214I3L0E3 225 aa20.53■□□□□ 0.88
SREBF1-213ENST00000485080 PIK3CDO00329 1044 aa20.53■□□□□ 0.88
SREBF1-213ENST00000485080 MLLT1Q03111 559 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-213ENST00000485080 ANKRD1Q15327 319 aa20.53■□□□□ 0.88
SREBF1-213ENST00000485080 NTRK3Q16288 839 aa20.53■□□□□ 0.88
SREBF1-213ENST00000485080 ZNF713Q8N859 430 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-213ENST00000485080 NSUN6Q8TEA1 469 aaKnown RBP20.53■□□□□ 0.88
SREBF1-213ENST00000485080 GCOM1H8Y6P7 765 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-213ENST00000485080 FARP2O94887 1054 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-213ENST00000485080 CFBP00751 764 aa20.52■□□□□ 0.88
SREBF1-213ENST00000485080 POLR2MP0CAP2 368 aa20.52■□□□□ 0.88
SREBF1-213ENST00000485080 IFNAR1P17181 557 aa20.52■□□□□ 0.88
SREBF1-213ENST00000485080 RBM25P49756 843 aaKnown RBP20.52■□□□□ 0.88
SREBF1-213ENST00000485080 CCDC82Q8N4S0 544 aa20.52■□□□□ 0.88
SREBF1-213ENST00000485080 PIBF1Q8WXW3 757 aa20.52■□□□□ 0.88
SREBF1-213ENST00000485080 RMDN3Q96TC7 470 aa20.52■□□□□ 0.88
SREBF1-213ENST00000485080 NAP1L2Q9ULW6 460 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-213ENST00000485080 V9GY48 417 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-213ENST00000485080 FRMPD3Q5JV73 1810 aa20.52■□□□□ 0.88
SREBF1-213ENST00000485080 RBM47A0AV96 593 aaKnown RBP20.51■□□□□ 0.87
SREBF1-213ENST00000485080 DUSP11O75319 330 aaKnown RBP20.51■□□□□ 0.87
SREBF1-213ENST00000485080 RARBP10826 455 aa20.51■□□□□ 0.87
SREBF1-213ENST00000485080 NKX3-2P78367 333 aa20.51■□□□□ 0.87
SREBF1-213ENST00000485080 CCDC144BQ3MJ40 725 aa20.51■□□□□ 0.87
SREBF1-213ENST00000485080 TAPT1Q6NXT6 567 aa20.51■□□□□ 0.87
SREBF1-213ENST00000485080 PPP1R18Q6NYC8 613 aa20.51■□□□□ 0.87
SREBF1-213ENST00000485080 ARRDC4Q8NCT1 418 aa20.51■□□□□ 0.87
SREBF1-213ENST00000485080 TAAR1Q96RJ0 339 aa20.51■□□□□ 0.87
SREBF1-213ENST00000485080 ZHX1Q9UKY1 873 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-213ENST00000485080 CEP290O15078 2479 aa20.5■□□□□ 0.87
SREBF1-213ENST00000485080 PRPF3O43395 683 aaKnown RBP20.5■□□□□ 0.87
SREBF1-213ENST00000485080 IQSEC1Q6DN90 963 aa20.5■□□□□ 0.87
SREBF1-213ENST00000485080 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
SREBF1-213ENST00000485080 C22orf23Q9BZE7 217 aa20.5■□□□□ 0.87
SREBF1-213ENST00000485080 PXMP2Q9NR77 195 aa20.5■□□□□ 0.87
SREBF1-213ENST00000485080 FRMPD4Q14CM0 1322 aa20.5■□□□□ 0.87
SREBF1-213ENST00000485080 LRRC37A2A6NM11 1700 aa20.5■□□□□ 0.87
SREBF1-213ENST00000485080 DNAH12Q6ZR08 3092 aa20.5■□□□□ 0.87
SREBF1-213ENST00000485080 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
SREBF1-213ENST00000485080 DNM1LO00429 736 aa20.49■□□□□ 0.87
SREBF1-213ENST00000485080 COL6A1P12109 1028 aa20.49■□□□□ 0.87
SREBF1-213ENST00000485080 PDE4DQ08499 809 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms