RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 PKN1Q16512 942 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 PRR5LQ6MZQ0 368 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 LEKR1Q6ZMV7 388 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 TMC6Q7Z403 805 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 UBE2Q1Q7Z7E8 422 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 CCAR2Q8N163 923 aaKnown RBP10.32□□□□□ -0.76
USP16-206ENST00000485067 FERMT2Q96AC1 680 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 DHRS1Q96LJ7 313 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 TRPV5Q9NQA5 729 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 SPATS2LQ9NUQ6 558 aaKnown RBP10.32□□□□□ -0.76
USP16-206ENST00000485067 DDX41Q9UJV9 622 aaKnown RBP10.32□□□□□ -0.76
USP16-206ENST00000485067 PCDHA5Q9Y5H7 936 aa10.32□□□□□ -0.76
USP16-206ENST00000485067 UBR3Q6ZT12 1888 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 hCG_1642624A0A1W2PR95 340 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 USP17L12C9JPN9 530 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 USP17L21D6R901 530 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 ZSCAN9O15535 394 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 NMT2O60551 498 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 GYS1P13807 737 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 LMOD1P29536 600 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 TBC1D8BQ0IIM8 1120 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 NR5A1Q13285 461 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 TMED1Q13445 227 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 ARID5BQ14865 1188 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 CCDC92Q53HC0 331 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 TMTC3Q6ZXV5 915 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 CCDC112Q8NEF3 446 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 CTCFLQ8NI51 663 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 SMARCE1Q969G3 411 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 TRIM11Q96F44 468 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 FAM163AQ96GL9 167 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 HSD3B7Q9H2F3 369 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 CABP5Q9NP86 173 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 DCP1AQ9NPI6 582 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 MKS1Q9NXB0 559 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 PCDHB6Q9Y5E3 794 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 BAZ2BQ9UIF8 2168 aaKnown RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 POLR2DO15514 142 aaKnown RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 SERPINC1P01008 464 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 RDXP35241 583 aaKnown RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 SARSP49591 514 aaKnown RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 UBASH3AP57075 661 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 PREPLQ4J6C6 727 aaPredicted RBP10.31□□□□□ -0.76
USP16-206ENST00000485067 KRT222Q8N1A0 295 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 CNBD1Q8NA66 436 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 SHISA4Q96DD7 197 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 IFT122Q9HBG6 1241 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 ZNF446Q9NWS9 450 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 TMEM98Q9Y2Y6 226 aa10.31□□□□□ -0.76
USP16-206ENST00000485067 SNUPNO95149 360 aaKnown RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 MMEP08473 750 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 TRAPPC10P48553 1259 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 DDR1Q08345 913 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 GRIK3Q13003 919 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 DIXDC1Q155Q3 683 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 FOXP4Q8IVH2 680 aaPredicted RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 RBM46Q8TBY0 533 aaKnown RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 PYM1Q9BRP8 204 aaKnown RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 TBC1D7Q9P0N9 293 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 ANKIB1Q9P2G1 1089 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 MAN1B1Q9UKM7 699 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 TRPC5Q9UL62 973 aaPredicted RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 V9GY48 417 aaPredicted RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 KIF5BP33176 963 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 GPSM2P81274 684 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 MORC3Q14149 939 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 SFMBT2Q5VUG0 894 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 ISM2Q6H9L7 571 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 ARMCX5Q6P1M9 558 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 CC2D1AQ6P1N0 951 aaPredicted RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 SPATA20Q8TB22 786 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 WDR66Q8TBY9 1149 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 ZNF483Q8TF39 744 aaPredicted RBP10.3□□□□□ -0.76
USP16-206ENST00000485067 SCYL1Q96KG9 808 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 CSRNP2Q9H175 543 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 VPS54Q9P1Q0 977 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 ODF2LQ9ULJ1 636 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 LEMD3Q9Y2U8 911 aa10.3□□□□□ -0.76
USP16-206ENST00000485067 ERCC5P28715 1186 aaPredicted RBP10.29□□□□□ -0.76
USP16-206ENST00000485067 TPP2P29144 1249 aaPredicted RBP10.29□□□□□ -0.76
USP16-206ENST00000485067 GSTO1P78417 241 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 SAPCD2Q86UD0 394 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 DZIP1Q86YF9 867 aaKnown RBP10.29□□□□□ -0.76
USP16-206ENST00000485067 VSTM4Q8IW00 320 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 KIF18AQ8NI77 898 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 GLMNQ92990 594 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 LMCD1Q9NZU5 365 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 SPATA7Q9P0W8 599 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 SERTAD1Q9UHV2 236 aa10.29□□□□□ -0.76
USP16-206ENST00000485067 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.29□□□□□ -0.76
USP16-206ENST00000485067 BOLA2-SMG1P6H3BVE0 249 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 PLEKHA8P1O95397 391 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 ATP1A3P13637 1013 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 PRPHP41219 470 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 CFAP100Q494V2 611 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 FAM47AQ5JRC9 791 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms