RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 ADD2P35612 726 aa11.77□□□□□ -0.53
TRUB1-202ENST00000485065 PUS10Q3MIT2 529 aaKnown RBP11.77□□□□□ -0.53
TRUB1-202ENST00000485065 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.53
TRUB1-202ENST00000485065 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRUB1-202ENST00000485065 LCORLQ8N3X6 602 aa11.77□□□□□ -0.53
TRUB1-202ENST00000485065 UBE2ZQ9H832 354 aaPredicted RBP11.77□□□□□ -0.53
TRUB1-202ENST00000485065 CERS4Q9HA82 394 aa11.77□□□□□ -0.53
TRUB1-202ENST00000485065 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.53
TRUB1-202ENST00000485065 MAGEB6P1A0A0J9YX57 407 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 ADCY6O43306 1168 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 PRKAB2O43741 272 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 ITGA7Q13683 1181 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 TTLL4Q14679 1199 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 REPS2Q8NFH8 660 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-202ENST00000485065 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-202ENST00000485065 MFSD14AQ96MC6 490 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 YTHDC1Q96MU7 727 aaKnown RBP11.76□□□□□ -0.53
TRUB1-202ENST00000485065 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-202ENST00000485065 MYH7P12883 1935 aa11.76□□□□□ -0.53
TRUB1-202ENST00000485065 MPHOSPH10O00566 681 aaKnown RBP11.75□□□□□ -0.53
TRUB1-202ENST00000485065 B4GALT4O60513 344 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 CYP2D6P10635 497 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
TRUB1-202ENST00000485065 RFC2P35250 354 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 SDR42E1Q8WUS8 393 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 ARMT1Q9H993 441 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 DCP1AQ9NPI6 582 aaPredicted RBP11.75□□□□□ -0.53
TRUB1-202ENST00000485065 ECHDC1Q9NTX5 307 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 PPP1R9AQ9ULJ8 1098 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 GRIN2DO15399 1336 aa11.75□□□□□ -0.53
TRUB1-202ENST00000485065 GRXCR2A6NFK2 248 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 ZEB2O60315 1214 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
TRUB1-202ENST00000485065 SUPT20HL2P0C7V6 817 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 UBE3CQ15386 1083 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 CXCL17Q6UXB2 119 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 HERC6Q8IVU3 1022 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 SPICE1Q8N0Z3 855 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 SCLYQ96I15 445 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 PRRX2Q99811 253 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 TEX13BQ9BXU2 312 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 PUS7LQ9H0K6 701 aaKnown RBP11.74□□□□□ -0.53
TRUB1-202ENST00000485065 TRPV6Q9H1D0 765 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 SALL3Q9BXA9 1300 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 BAZ2AQ9UIF9 1905 aaKnown RBP11.74□□□□□ -0.53
TRUB1-202ENST00000485065 MCM3APO60318 1980 aa11.74□□□□□ -0.53
TRUB1-202ENST00000485065 PTPRZ1P23471 2315 aaPredicted RBP11.74□□□□□ -0.53
TRUB1-202ENST00000485065 ATP2A1O14983 1001 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 ZNF536O15090 1300 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 ARHGEF15O94989 841 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 MBD4O95243 580 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 ICA1Q05084 483 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
TRUB1-202ENST00000485065 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 KATNBL1Q9H079 304 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 FBXO28Q9NVF7 368 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 PRKAG3Q9UGI9 489 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 GNEQ9Y223 722 aaKnown RBP11.73□□□□□ -0.53
TRUB1-202ENST00000485065 Q9Y3F1 56 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 CFAP54Q96N23 3096 aa11.73□□□□□ -0.53
TRUB1-202ENST00000485065 ASTN1O14525 1302 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 CYP2D7A0A087X1C5 515 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 BAIAP3O94812 1187 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 IL9P15248 144 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 BEX3Q00994 111 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 TNFAIP2Q03169 654 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
TRUB1-202ENST00000485065 HFE2Q6ZVN8 426 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 DYNLL2Q96FJ2 89 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 CCDC17Q96LX7 622 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 FGD4Q96M96 766 aa11.72□□□□□ -0.53
TRUB1-202ENST00000485065 UPF3BQ9BZI7 483 aaKnown RBP11.72□□□□□ -0.53
TRUB1-202ENST00000485065 CRNKL1Q9BZJ0 848 aaKnown RBP11.72□□□□□ -0.53
TRUB1-202ENST00000485065 ALDH8A1Q9H2A2 487 aaPredicted RBP11.72□□□□□ -0.53
TRUB1-202ENST00000485065 USP34Q70CQ2 3546 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 TNKSO95271 1327 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 KCNA5P22460 613 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 PKN1Q16512 942 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 C12orf60Q5U649 245 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 BMP8AQ7Z5Y6 402 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 KBTBD3Q8NAB2 608 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 NEK9Q8TD19 979 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 WNT2BQ93097 391 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 STRBPQ96SI9 672 aaKnown RBP11.71□□□□□ -0.53
TRUB1-202ENST00000485065 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 AP5M1Q9H0R1 490 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 GOPCQ9HD26 462 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 MCM9Q9NXL9 1143 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
TRUB1-202ENST00000485065 CACNA1HO95180 2353 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms