RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 GRB10Q13322 594 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 PLEKHN1Q494U1 663 aaPredicted RBP6.78□□□□□ -1.32
SMC4-215ENST00000484799 ERICH6BQ5W0A0 696 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 TTLL10Q6ZVT0 673 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 CPNE8Q86YQ8 564 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 ARHGEF39Q8N4T4 335 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 BVESQ8NE79 360 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 KIAA1522Q9P206 1035 aaPredicted RBP6.78□□□□□ -1.32
SMC4-215ENST00000484799 DBHP09172 617 aa6.77□□□□□ -1.33
SMC4-215ENST00000484799 VMACQ2NL98 169 aa6.77□□□□□ -1.33
SMC4-215ENST00000484799 TNNI3KQ59H18 835 aa6.77□□□□□ -1.33
SMC4-215ENST00000484799 ALG3Q92685 438 aa6.77□□□□□ -1.33
SMC4-215ENST00000484799 RAPGEFL1Q9UHV5 662 aa6.77□□□□□ -1.33
SMC4-215ENST00000484799 RWDD3Q9Y3V2 267 aa6.77□□□□□ -1.33
SMC4-215ENST00000484799 UNCXA6NJT0 531 aa6.76□□□□□ -1.33
SMC4-215ENST00000484799 SRGAP3O43295 1099 aa6.76□□□□□ -1.33
SMC4-215ENST00000484799 NCAM1P13591 858 aa6.76□□□□□ -1.33
SMC4-215ENST00000484799 ZNF143P52747 638 aaPredicted RBP6.76□□□□□ -1.33
SMC4-215ENST00000484799 SV2CQ496J9 727 aa6.76□□□□□ -1.33
SMC4-215ENST00000484799 LARP1BQ659C4 914 aaKnown RBP6.76□□□□□ -1.33
SMC4-215ENST00000484799 FAM129CQ86XR2 697 aa6.76□□□□□ -1.33
SMC4-215ENST00000484799 DACT3Q96B18 629 aaPredicted RBP6.76□□□□□ -1.33
SMC4-215ENST00000484799 PEX11GQ96HA9 241 aa6.76□□□□□ -1.33
SMC4-215ENST00000484799 PCDHA5Q9Y5H7 936 aa6.76□□□□□ -1.33
SMC4-215ENST00000484799 MRVI1Q9Y6F6 885 aa6.76□□□□□ -1.33
SMC4-215ENST00000484799 DDAH1O94760 285 aa6.75□□□□□ -1.33
SMC4-215ENST00000484799 ATF4P18848 351 aaPredicted RBP6.75□□□□□ -1.33
SMC4-215ENST00000484799 IGDCC3Q8IVU1 814 aa6.75□□□□□ -1.33
SMC4-215ENST00000484799 MARCH10Q8NA82 808 aaPredicted RBP6.75□□□□□ -1.33
SMC4-215ENST00000484799 KLHL6Q8WZ60 621 aa6.75□□□□□ -1.33
SMC4-215ENST00000484799 RELTQ969Z4 430 aa6.75□□□□□ -1.33
SMC4-215ENST00000484799 BTG4Q9NY30 223 aa6.75□□□□□ -1.33
SMC4-215ENST00000484799 ACTR10Q9NZ32 417 aa6.75□□□□□ -1.33
SMC4-215ENST00000484799 GULP1Q9UBP9 304 aa6.75□□□□□ -1.33
SMC4-215ENST00000484799 IRS4O14654 1257 aaPredicted RBP6.74□□□□□ -1.33
SMC4-215ENST00000484799 FUCA1P04066 466 aa6.74□□□□□ -1.33
SMC4-215ENST00000484799 HOXA5P20719 270 aa6.74□□□□□ -1.33
SMC4-215ENST00000484799 FOXO4P98177 505 aa6.74□□□□□ -1.33
SMC4-215ENST00000484799 SLC9A5Q14940 896 aa6.74□□□□□ -1.33
SMC4-215ENST00000484799 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
SMC4-215ENST00000484799 IQCEQ6IPM2 695 aa6.74□□□□□ -1.33
SMC4-215ENST00000484799 SP8Q8IXZ3 490 aa6.74□□□□□ -1.33
SMC4-215ENST00000484799 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMC4-215ENST00000484799 B8ZZF3 427 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 SMAD7O15105 426 aaKnown RBP6.73□□□□□ -1.33
SMC4-215ENST00000484799 ZBTB7AO95365 584 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 LIMS1P48059 325 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 SCRN1Q12765 414 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 FXNQ16595 210 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 TMEFF1Q8IYR6 380 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 MCMBPQ9BTE3 642 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 RNF38Q9H0F5 515 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 RXFP1Q9HBX9 757 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 GPRC5CQ9NQ84 441 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 CLEC1BQ9P126 229 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 SUSD2Q9UGT4 822 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 EMC9Q9Y3B6 208 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 PMF1-BGLAPU3KQ54 211 aa6.73□□□□□ -1.33
SMC4-215ENST00000484799 AGRPO00253 132 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 MYO1BO43795 1136 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 PLS3P13797 630 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 KCNJ6P48051 423 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 CEBPAP49715 358 aaPredicted RBP6.72□□□□□ -1.33
SMC4-215ENST00000484799 ZDHHC14Q8IZN3 488 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 FAM169BQ8N8A8 192 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 NETO2Q8NC67 525 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 DDX11Q96FC9 970 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 AP5M1Q9H0R1 490 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 CYP26B1Q9NR63 512 aa6.72□□□□□ -1.33
SMC4-215ENST00000484799 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMC4-215ENST00000484799 C7orf72A4D263 438 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 KCNC1P48547 511 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 ARID5AQ03989 594 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 NFIXQ14938 502 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 FAM178BQ8IXR5 827 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 LINC01356Q8N9X3 169 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 CHAMP1Q96JM3 812 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 MARCH2Q9P0N8 246 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 APEX2Q9UBZ4 518 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 HCFC2Q9Y5Z7 792 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 IRS2Q9Y4H2 1338 aa6.71□□□□□ -1.34
SMC4-215ENST00000484799 TRIM13O60858 407 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 NTRK1P04629 796 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 GLI4P10075 376 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 TCF3P15923 654 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 HOXC12P31275 282 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 GTF2IRD2BQ6EKJ0 949 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 C6orf15Q6UXA7 325 aaPredicted RBP6.7□□□□□ -1.34
SMC4-215ENST00000484799 GTF2IRD2Q86UP8 949 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 KCNC2Q96PR1 638 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 MMP19Q99542 508 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 EPB41L4AQ9HCS5 686 aaPredicted RBP6.7□□□□□ -1.34
SMC4-215ENST00000484799 USP40Q9NVE5 1235 aa6.7□□□□□ -1.34
SMC4-215ENST00000484799 SNRPB2P08579 225 aaKnown RBP6.69□□□□□ -1.34
SMC4-215ENST00000484799 ECI1P42126 302 aa6.69□□□□□ -1.34
SMC4-215ENST00000484799 WWC2Q6AWC2 1192 aa6.69□□□□□ -1.34
SMC4-215ENST00000484799 TTLL7Q6ZT98 887 aa6.69□□□□□ -1.34
SMC4-215ENST00000484799 DCP2Q8IU60 420 aaKnown RBP6.69□□□□□ -1.34
SMC4-215ENST00000484799 TRIM59Q8IWR1 403 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms