RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 CNTN2Q02246 1040 aa16.16■□□□□ 0.18
HDLBP-240ENST00000484412 RTN1Q16799 776 aa16.16■□□□□ 0.18
HDLBP-240ENST00000484412 TRPV1Q8NER1 839 aa16.16■□□□□ 0.18
HDLBP-240ENST00000484412 PLXNA1Q9UIW2 1896 aa16.16■□□□□ 0.18
HDLBP-240ENST00000484412 RBM47A0AV96 593 aaKnown RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 PRPF3O43395 683 aaKnown RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 IFNAR1P17181 557 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 ADD1P35611 737 aaKnown RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 APOBRQ0VD83 1088 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 IQSEC1Q6DN90 963 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 MICU3Q86XE3 530 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 FAM177A1Q8N128 213 aaPredicted RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 SYTL5Q8TDW5 730 aaPredicted RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 TBC1D5Q92609 795 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 HOMER2Q9NSB8 354 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 DDX20Q9UHI6 824 aaKnown RBP16.15■□□□□ 0.18
HDLBP-240ENST00000484412 Q9Y3F1 56 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 ASTN1O14525 1302 aa16.15■□□□□ 0.18
HDLBP-240ENST00000484412 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 EN2P19622 333 aaPredicted RBP16.14■□□□□ 0.17
HDLBP-240ENST00000484412 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
HDLBP-240ENST00000484412 METAP2P50579 478 aaKnown RBP eCLIP16.14■□□□□ 0.173e-7■■□□□ 13.2
HDLBP-240ENST00000484412 ACVR2BQ13705 512 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 NSMFQ6X4W1 530 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 ARMCX2Q7L311 632 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 CCDC144CPQ8IYA2 1237 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 DEFB118Q96PH6 123 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 KIF2CQ99661 725 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 RNF26Q9BY78 433 aaPredicted RBP16.14■□□□□ 0.17
HDLBP-240ENST00000484412 FAM184BQ9ULE4 1060 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 CNPY2Q9Y2B0 182 aa16.14■□□□□ 0.17
HDLBP-240ENST00000484412 KIAA0100Q14667 2235 aaKnown RBP16.14■□□□□ 0.17
HDLBP-240ENST00000484412 BAZ2BQ9UIF8 2168 aaKnown RBP16.13■□□□□ 0.17
HDLBP-240ENST00000484412 RXRAP19793 462 aa16.13■□□□□ 0.17
HDLBP-240ENST00000484412 ALDH5A1P51649 535 aaPredicted RBP16.13■□□□□ 0.17
HDLBP-240ENST00000484412 USH1GQ495M9 461 aa16.13■□□□□ 0.17
HDLBP-240ENST00000484412 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
HDLBP-240ENST00000484412 SHISA4Q96DD7 197 aa16.13■□□□□ 0.17
HDLBP-240ENST00000484412 GLT8D2Q9H1C3 349 aa16.13■□□□□ 0.17
HDLBP-240ENST00000484412 SEC63Q9UGP8 760 aaKnown RBP16.13■□□□□ 0.17
HDLBP-240ENST00000484412 V9GY48 417 aaPredicted RBP16.13■□□□□ 0.17
HDLBP-240ENST00000484412 MYH6P13533 1939 aa16.13■□□□□ 0.17
HDLBP-240ENST00000484412 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 GOLGA8AA7E2F4 631 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 GOLGA8BA8MQT2 603 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 GCOM1H8Y6P7 765 aaPredicted RBP16.12■□□□□ 0.17
HDLBP-240ENST00000484412 MEIS2O14770 477 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 DUSP11O75319 330 aaKnown RBP16.12■□□□□ 0.17
HDLBP-240ENST00000484412 POLR2MP0CAP2 368 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 AKR1A1P14550 325 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 MNX1P50219 401 aaPredicted RBP16.12■□□□□ 0.17
HDLBP-240ENST00000484412 TAPT1Q6NXT6 567 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 VSIG10LQ86VR7 867 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 ARRDC4Q8NCT1 418 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 TAAR1Q96RJ0 339 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 C22orf23Q9BZE7 217 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 UPF3BQ9BZI7 483 aaKnown RBP16.12■□□□□ 0.17
HDLBP-240ENST00000484412 VTA1Q9NP79 307 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
HDLBP-240ENST00000484412 PFKFB2O60825 505 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 TFRCP02786 760 aaKnown RBP16.11■□□□□ 0.17
HDLBP-240ENST00000484412 PKN1Q16512 942 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 PFKFB3Q16875 520 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-240ENST00000484412 PRAMEF19Q5SWL8 479 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 PPP1R18Q6NYC8 613 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 XRRA1Q6P2D8 792 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 HOMER1Q86YM7 354 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 CMTR1Q8N1G2 835 aaKnown RBP16.11■□□□□ 0.17
HDLBP-240ENST00000484412 BACH2Q9BYV9 841 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 FRMPD4Q14CM0 1322 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 HTTP42858 3142 aa16.11■□□□□ 0.17
HDLBP-240ENST00000484412 ESYT2A0FGR8 921 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 EIF3JO75822 258 aaKnown RBP16.1■□□□□ 0.17
HDLBP-240ENST00000484412 STAM2O75886 525 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 CFBP00751 764 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 NEK4P51957 841 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 SOX10P56693 466 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 MCTP2Q6DN12 878 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 SLC30A10Q6XR72 485 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 KLHDC9Q8NEP7 349 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 RMDN3Q96TC7 470 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 TSEN34Q9BSV6 310 aaKnown RBP16.1■□□□□ 0.17
HDLBP-240ENST00000484412 SH3GLB2Q9NR46 395 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 COL20A1Q9P218 1284 aa16.1■□□□□ 0.17
HDLBP-240ENST00000484412 NKRFO15226 690 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDLBP-240ENST00000484412 NR3C2P08235 984 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 TGFB3P10600 412 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 COL6A1P12109 1028 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 TAL1P17542 331 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-240ENST00000484412 CALML3P27482 149 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 CST5P28325 142 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-240ENST00000484412 AK2P54819 239 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 GJA9P57773 515 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 STXBP2Q15833 593 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 CCDC82Q8N4S0 544 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms