RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 C9orf50Q5SZB4 431 aa13.97□□□□□ -0.17
SNRNP200-206ENST00000484372 TMEM199Q8N511 208 aa13.97□□□□□ -0.17
SNRNP200-206ENST00000484372 DNERQ8NFT8 737 aa13.97□□□□□ -0.17
SNRNP200-206ENST00000484372 MORC4Q8TE76 937 aa13.97□□□□□ -0.17
SNRNP200-206ENST00000484372 ANKS1AQ92625 1134 aa13.97□□□□□ -0.17
SNRNP200-206ENST00000484372 PARP1P09874 1014 aaKnown RBP13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 RPS6P62753 249 aaKnown RBP13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 SMAD3P84022 425 aaKnown RBP13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 USH1GQ495M9 461 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 DUSP28Q4G0W2 176 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 IFIT1BQ5T764 474 aaKnown RBP13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 TTC22Q5TAA0 569 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 MFSD5Q6N075 450 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 TAPT1Q6NXT6 567 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 CXCL17Q6UXB2 119 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 RGS22Q8NE09 1264 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 WDR11Q9BZH6 1224 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 UBA5Q9GZZ9 404 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 PDGFCQ9NRA1 345 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 ZSWIM5Q9P217 1185 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 LTBP2Q14767 1821 aa13.96□□□□□ -0.17
SNRNP200-206ENST00000484372 ASTN1O14525 1302 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 TNKSO95271 1327 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 ABCB11O95342 1321 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 NKRFO15226 690 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 ITGB8P26012 769 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 CPT1AP50416 773 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 IRX5P78411 483 aaPredicted RBP13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 ITGA7Q13683 1181 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 MCF2L2Q86YR7 1114 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 CLEC4DQ8WXI8 215 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 PURBQ96QR8 312 aaKnown RBP13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 POLR3EQ9NVU0 708 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 TBX21Q9UL17 535 aa13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
SNRNP200-206ENST00000484372 ERICH2A1L162 156 aa13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 CTAGE5O15320 804 aa13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 PPP2R5BQ15173 497 aa13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 SLC30A10Q6XR72 485 aa13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 FAM126BQ8IXS8 530 aa13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 SCFD2Q8WU76 684 aa13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 MRPL11Q9Y3B7 192 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-206ENST00000484372 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 RBM47A0AV96 593 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 TRAF1Q13077 416 aa13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 SART3Q15020 963 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 PSRC1Q6PGN9 363 aaPredicted RBP13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 RALYLQ86SE5 291 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 FBXO11Q86XK2 927 aa13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 SLC43A3Q8NBI5 491 aa13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 OR6J1Q8NGC5 347 aa13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 FAM161BQ96MY7 647 aa13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 MTIF3Q9H2K0 278 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 VAT1LQ9HCJ6 419 aa13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 DDX49Q9Y6V7 483 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-206ENST00000484372 TMEM265A0A087WTH1 108 aa13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 KPNA6O60684 536 aa13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 SUPT20HL2P0C7V6 817 aa13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 GSPT1P15170 499 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 PDE4AP27815 886 aa13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 TTLL4Q14679 1199 aa13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 HIPK3Q9H422 1215 aa13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 LAMA4Q16363 1823 aa13.92□□□□□ -0.18
SNRNP200-206ENST00000484372 CD4P01730 458 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 MYL3P08590 195 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 TXNP10599 105 aaKnown RBP13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 EDNRBP24530 442 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 CHMLP26374 656 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 EPHB4P54760 987 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 QRICH1Q2TAL8 776 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 IWS1Q96ST2 819 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 MTG1Q9BT17 334 aaPredicted RBP13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 AMNQ9BXJ7 453 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 SEMA6BQ9H3T3 888 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
SNRNP200-206ENST00000484372 KLRF2D3W0D1 207 aa13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 IFIT3O14879 490 aaKnown RBP13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 CSF2RAP15509 400 aa13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 STXBP2Q15833 593 aa13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 ARHGEF16Q5VV41 709 aa13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 SYTL5Q8TDW5 730 aaPredicted RBP13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 RMDN3Q96TC7 470 aa13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 JMJD4Q9H9V9 463 aa13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 IL23AQ9NPF7 189 aa13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 MAP3K20Q9NYL2 800 aaKnown RBP13.9□□□□□ -0.18
SNRNP200-206ENST00000484372 FGBP02675 491 aa13.89□□□□□ -0.19
SNRNP200-206ENST00000484372 CYP21A2P08686 494 aa13.89□□□□□ -0.19
SNRNP200-206ENST00000484372 CYP2C18P33260 490 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms