RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PIGSQ96S52 555 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 ADD3Q9UEY8 706 aaKnown RBP14.29□□□□□ -0.12
MSH5-216ENST00000484309 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 A0A1W2PQ45 241 aaPredicted RBP14.28□□□□□ -0.12
MSH5-216ENST00000484309 A0A1W2PQY0 241 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 CCDC69A6NI79 296 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 BEX3Q00994 111 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 TNFAIP2Q03169 654 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 TRIM60Q495X7 471 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 RNF20Q5VTR2 975 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 DOCK5Q9H7D0 1870 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 COL20A1Q9P218 1284 aa14.28□□□□□ -0.12
MSH5-216ENST00000484309 RBM27Q9P2N5 1060 aaKnown RBP14.28□□□□□ -0.12
MSH5-216ENST00000484309 DNAH12Q6ZR08 3092 aa14.27□□□□□ -0.12
MSH5-216ENST00000484309 ZBTB5O15062 677 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 CYTH3O43739 400 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 CFBP00751 764 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 SMPD1P17405 629 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 ACLYP53396 1101 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 PDE4DQ08499 809 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 KCNA10Q16322 511 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 ADCK5Q3MIX3 580 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 TAPT1Q6NXT6 567 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 KLHDC9Q8NEP7 349 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 CTCFLQ8NI51 663 aaPredicted RBP14.27□□□□□ -0.13
MSH5-216ENST00000484309 MORC4Q8TE76 937 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 MTMR8Q96EF0 704 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 TMEM87BQ96K49 555 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 TAAR1Q96RJ0 339 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 RIOX1Q9H6W3 641 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 VTA1Q9NP79 307 aa14.27□□□□□ -0.13
MSH5-216ENST00000484309 MRPL11Q9Y3B7 192 aaKnown RBP14.27□□□□□ -0.13
MSH5-216ENST00000484309 OPLAHO14841 1288 aa14.26□□□□□ -0.13
MSH5-216ENST00000484309 DDAH1O94760 285 aa14.26□□□□□ -0.13
MSH5-216ENST00000484309 PLEKHA8P1O95397 391 aa14.26□□□□□ -0.13
MSH5-216ENST00000484309 MAGEA10P43363 369 aaPredicted RBP14.26□□□□□ -0.13
MSH5-216ENST00000484309 GJA9P57773 515 aa14.26□□□□□ -0.13
MSH5-216ENST00000484309 TLK2Q86UE8 772 aa14.26□□□□□ -0.13
MSH5-216ENST00000484309 CMTR1Q8N1G2 835 aaKnown RBP14.26□□□□□ -0.13
MSH5-216ENST00000484309 SYTL5Q8TDW5 730 aaPredicted RBP14.26□□□□□ -0.13
MSH5-216ENST00000484309 NEK1Q96PY6 1258 aa14.26□□□□□ -0.13
MSH5-216ENST00000484309 UPF3AQ9H1J1 476 aaKnown RBP14.26□□□□□ -0.13
MSH5-216ENST00000484309 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
MSH5-216ENST00000484309 PRDM5Q9NQX1 630 aaPredicted RBP14.26□□□□□ -0.13
MSH5-216ENST00000484309 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
MSH5-216ENST00000484309 CTAGE5O15320 804 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 DYNC1LI2O43237 492 aaPredicted RBP14.25□□□□□ -0.13
MSH5-216ENST00000484309 ASGR1P07306 291 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 CPA1P15085 419 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 MDM2Q00987 491 aaPredicted RBP14.25□□□□□ -0.13
MSH5-216ENST00000484309 SNX17Q15036 470 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 GNASQ5JWF2 1037 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 CCSAPQ6IQ19 270 aaPredicted RBP14.25□□□□□ -0.13
MSH5-216ENST00000484309 MICU3Q86XE3 530 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 MCF2L2Q86YR7 1114 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 RGS22Q8NE09 1264 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 TSEN34Q9BSV6 310 aaKnown RBP14.25□□□□□ -0.13
MSH5-216ENST00000484309 MTA3Q9BTC8 594 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 STARD7Q9NQZ5 370 aa14.25□□□□□ -0.13
MSH5-216ENST00000484309 GNEQ9Y223 722 aaKnown RBP14.25□□□□□ -0.13
MSH5-216ENST00000484309 PQBP1O60828 265 aaKnown RBP14.24□□□□□ -0.13
MSH5-216ENST00000484309 EIF2AK2P19525 551 aaKnown RBP14.24□□□□□ -0.13
MSH5-216ENST00000484309 EDNRBP24530 442 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 CST5P28325 142 aaPredicted RBP14.24□□□□□ -0.13
MSH5-216ENST00000484309 HOXA13P31271 388 aaPredicted RBP14.24□□□□□ -0.13
MSH5-216ENST00000484309 KIF5BP33176 963 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 TLE2Q04725 743 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 IQSEC1Q6DN90 963 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 DNERQ8NFT8 737 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 VTI1AQ96AJ9 217 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 MPHOSPH6Q99547 160 aaKnown RBP14.24□□□□□ -0.13
MSH5-216ENST00000484309 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 AP5M1Q9H0R1 490 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 SLC12A7Q9Y666 1083 aa14.24□□□□□ -0.13
MSH5-216ENST00000484309 LOC102724159A0A0B4J2E5 919 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 PNMA6FA0A0J9YX94 578 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 hCG_1642624A0A1W2PR95 340 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 MOXD2PA6NHM9 499 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 LIFRP42702 1097 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 PWP2Q15269 919 aaKnown RBP14.23□□□□□ -0.13
MSH5-216ENST00000484309 FSCN1Q16658 493 aaKnown RBP14.23□□□□□ -0.13
MSH5-216ENST00000484309 SH3RF1Q7Z6J0 888 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 TMTC2Q8N394 836 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 CCDC82Q8N4S0 544 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 SRBD1Q8N5C6 995 aaKnown RBP14.23□□□□□ -0.13
MSH5-216ENST00000484309 PCSK9Q8NBP7 692 aaKnown RBP14.23□□□□□ -0.13
MSH5-216ENST00000484309 COPS5Q92905 334 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 GLT1D1Q96MS3 346 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 RMDN3Q96TC7 470 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 GDF15Q99988 308 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 SPZ1Q9BXG8 430 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 PDLIM7Q9NR12 457 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 PRKAG2Q9UGJ0 569 aa14.23□□□□□ -0.13
MSH5-216ENST00000484309 B4DLN1 442 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 HSPA4P34932 840 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 HSD17B4P51659 736 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 MRPL12P52815 198 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms