RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 APPBP2Q92624 585 aa10.29□□□□□ -0.76
RTFDC1-208ENST00000484084 CHMP4CQ96CF2 233 aa10.29□□□□□ -0.76
RTFDC1-208ENST00000484084 SEC62Q99442 399 aaKnown RBP10.29□□□□□ -0.76
RTFDC1-208ENST00000484084 BCL11AQ9H165 835 aa10.29□□□□□ -0.76
RTFDC1-208ENST00000484084 PRR12Q9ULL5 1215 aa10.29□□□□□ -0.76
RTFDC1-208ENST00000484084 FAM86C2PA6NEL3 165 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 ZBBXA8MT70 800 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 PATL2C9JE40 543 aaKnown RBP10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 PI4K2BG5E9Z4 385 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 FDX1P10109 184 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 ALAS1P13196 640 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 AAK1Q2M2I8 961 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 TKFCQ3LXA3 575 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 KCTD1Q719H9 257 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 ZNF444Q8N0Y2 327 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 PHOSPHO2Q8TCD6 241 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 CLEC4DQ8WXI8 215 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 ARNTL2Q8WYA1 636 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 DDRGK1Q96HY6 314 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 AP5M1Q9H0R1 490 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 TSPYL2Q9H2G4 693 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 VTA1Q9NP79 307 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 COG5Q9UP83 839 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 COG6Q9Y2V7 657 aa10.28□□□□□ -0.76
RTFDC1-208ENST00000484084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 A6NJR5 290 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 NFIBO00712 420 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 TFAP4Q01664 338 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 BAATQ14032 418 aaPredicted RBP10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 NBPF20Q3BBV1 942 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 TMEM31Q5JXX7 168 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 RCSD1Q6JBY9 416 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 KIAA1211Q6ZU35 1233 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 FAM160B2Q86V87 743 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 COPS5Q92905 334 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 HLA-CQ95604 372 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 SLC9A7Q96T83 725 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 WDR11Q9BZH6 1224 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 RANBP17Q9H2T7 1088 aaKnown RBP10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 ECHDC1Q9NTX5 307 aa10.27□□□□□ -0.77
RTFDC1-208ENST00000484084 ZEB2O60315 1214 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 ARIH2O95376 493 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 ICAM1P05362 532 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 SUPT20HL2P0C7V6 817 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 EDNRBP24530 442 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 RFC2P35250 354 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 SLC1A4P43007 532 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 ALDH5A1P51649 535 aaPredicted RBP10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 SKIV2LQ15477 1246 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 NFRKBQ6P4R8 1299 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 TRAF7Q6Q0C0 670 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 SLC30A10Q6XR72 485 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 CHURC1Q8WUH1 139 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 DHX38Q92620 1227 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 LRRCC1Q9C099 1032 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 SUGCTQ9HAC7 445 aa10.26□□□□□ -0.77
RTFDC1-208ENST00000484084 NBNO60934 754 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 HMMRO75330 724 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 FGRP09769 529 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 TSPY3P0CV98 308 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 TSPY8P0CW00 308 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 SLC16A2P36021 539 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 TDO2P48775 406 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 WDR5P61964 334 aaKnown RBP10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 DEFB103AP81534 67 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 PPARAQ07869 468 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 C20orf194Q5TEA3 1177 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 BTNL9Q6UXG8 535 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 NSMFQ6X4W1 530 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 KAT2BQ92831 832 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 MTG1Q9BT17 334 aaPredicted RBP10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 CTDP1Q9Y5B0 961 aaPredicted RBP10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 TRIP12Q14669 1992 aaPredicted RBP10.25□□□□□ -0.77
RTFDC1-208ENST00000484084 BRWD1Q9NSI6 2320 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 SIP14410 1827 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 C5orf42Q9H799 3197 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 GTPBP6O43824 516 aaPredicted RBP10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 CXCL10P02778 98 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 MYL3P08590 195 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 GNAT2P19087 354 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 HIC1Q14526 733 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 MBTPS1Q14703 1052 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 CCDC62Q6P9F0 684 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 PI4K2BQ8TCG2 481 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 GDPD5Q8WTR4 605 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 WNT8BQ93098 351 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 CCPG1Q9ULG6 757 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 HCN4Q9Y3Q4 1203 aa10.24□□□□□ -0.77
RTFDC1-208ENST00000484084 USP34Q70CQ2 3546 aa10.23□□□□□ -0.77
RTFDC1-208ENST00000484084 LOC102724159A0A0B4J2E5 919 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms