RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 ZSCAN16Q9H4T2 348 aaPredicted RBP13.1□□□□□ -0.31
PTPN18-212ENST00000483617 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 DDX20Q9UHI6 824 aaKnown RBP13.1□□□□□ -0.31
PTPN18-212ENST00000483617 PFASO15067 1338 aa13.1□□□□□ -0.31
PTPN18-212ENST00000483617 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
PTPN18-212ENST00000483617 PALM3A6NDB9 673 aaPredicted RBP13.09□□□□□ -0.31
PTPN18-212ENST00000483617 F5H6K3 240 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 MSCO60682 206 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 COBLO75128 1261 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 F13A1P00488 732 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 FCER1AP12319 257 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 CYBAP13498 195 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 COPB2P35606 906 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 SLC1A4P43007 532 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 KLRC3Q07444 240 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 IKQ13123 557 aaPredicted RBP13.09□□□□□ -0.31
PTPN18-212ENST00000483617 SLFN13Q68D06 897 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 RIOX2Q8IUF8 465 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 GMCL1P1Q8NEA9 526 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 TRPV1Q8NER1 839 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 REPS2Q8NFH8 660 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 CCDC12Q8WUD4 166 aaPredicted RBP13.09□□□□□ -0.31
PTPN18-212ENST00000483617 RRP36Q96EU6 259 aaKnown RBP13.09□□□□□ -0.31
PTPN18-212ENST00000483617 MMP19Q99542 508 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 SLF1Q9BQI6 1058 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 SPZ1Q9BXG8 430 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 MAD2L2Q9UI95 211 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 ZNF214Q9UL59 606 aaPredicted RBP13.09□□□□□ -0.31
PTPN18-212ENST00000483617 MTMR6Q9Y217 621 aa13.09□□□□□ -0.31
PTPN18-212ENST00000483617 V9GY48 417 aaPredicted RBP13.09□□□□□ -0.31
PTPN18-212ENST00000483617 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.31
PTPN18-212ENST00000483617 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 PLEKHA8P1O95397 391 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 PDHBP11177 359 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 COL6A1P12109 1028 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 FDPSP14324 419 aaKnown RBP13.08□□□□□ -0.32
PTPN18-212ENST00000483617 CNGA1P29973 690 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 STAT3P40763 770 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 FOSBP53539 338 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 ZNF543Q08ER8 600 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 FAM177A1Q8N128 213 aaPredicted RBP13.08□□□□□ -0.32
PTPN18-212ENST00000483617 FBXO18Q8NFZ0 1043 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 MAML3Q96JK9 1138 aa13.08□□□□□ -0.32
PTPN18-212ENST00000483617 TRIOBPQ9H2D6 2365 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 SNHG28P0DPA3 235 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 CALML3P27482 149 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 TRAF1Q13077 416 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 PKP1Q13835 747 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 KCTD2Q14681 263 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 BRAPQ7Z569 592 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
PTPN18-212ENST00000483617 SRBD1Q8N5C6 995 aaKnown RBP13.07□□□□□ -0.32
PTPN18-212ENST00000483617 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 TEX13BQ9BXU2 312 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 CNTNAP5Q8WYK1 1306 aa13.07□□□□□ -0.32
PTPN18-212ENST00000483617 hCG_1984214I3L0E3 225 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 DNM1LO00429 736 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 GOLGA8HP0CJ92 632 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 BMP3P12645 472 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 SCG2P13521 617 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 GUCY1B3Q02153 619 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 STAG2Q8N3U4 1231 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 ZNF713Q8N859 430 aaPredicted RBP13.06□□□□□ -0.32
PTPN18-212ENST00000483617 PRPF38AQ8NAV1 312 aaKnown RBP13.06□□□□□ -0.32
PTPN18-212ENST00000483617 CHURC1Q8WUH1 139 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 PIBF1Q8WXW3 757 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
PTPN18-212ENST00000483617 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 PCDH10Q9P2E7 1040 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 ZDHHC9Q9Y397 364 aa13.06□□□□□ -0.32
PTPN18-212ENST00000483617 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
PTPN18-212ENST00000483617 ATP2A1O14983 1001 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 SEPT4O43236 478 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 DTNBO60941 627 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
PTPN18-212ENST00000483617 PGK2P07205 417 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
PTPN18-212ENST00000483617 FUT2Q10981 343 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 PFKFB3Q16875 520 aaPredicted RBP13.05□□□□□ -0.32
PTPN18-212ENST00000483617 KRT40Q6A162 431 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 ATL3Q6DD88 541 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 SNRNP48Q6IEG0 339 aaKnown RBP13.05□□□□□ -0.32
PTPN18-212ENST00000483617 CLEC17AQ6ZS10 378 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 FERMT3Q86UX7 667 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 KIFC2Q96AC6 838 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 VAT1LQ9HCJ6 419 aa13.05□□□□□ -0.32
PTPN18-212ENST00000483617 ZMYND8Q9ULU4 1186 aaPredicted RBP13.05□□□□□ -0.32
PTPN18-212ENST00000483617 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
PTPN18-212ENST00000483617 PLXNA1Q9UIW2 1896 aa13.04□□□□□ -0.32
PTPN18-212ENST00000483617 A0A1W2PPC1 479 aa13.04□□□□□ -0.32
PTPN18-212ENST00000483617 ZBED4O75132 1171 aa13.04□□□□□ -0.32
PTPN18-212ENST00000483617 NLRP5P59047 1200 aa13.04□□□□□ -0.32
PTPN18-212ENST00000483617 KRT85P78386 507 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms