RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SEC16BQ96JE7 1060 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-205ENST00000483122 TMBIM4Q9HC24 238 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 SALL4Q9UJQ4 1053 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
VTI1A-205ENST00000483122 MYH6P13533 1939 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 EME2A4GXA9 379 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 SRRM3A6NNA2 597 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 USO1O60763 962 aaKnown RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 CSB-PGBD3P0DP91 1061 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 XRCC4Q13426 336 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 MREGQ8N565 214 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 CCDC42Q96M95 316 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 CCDC85AQ96PX6 553 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 IFIH1Q9BYX4 1025 aaKnown RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 EXOC1Q9NV70 894 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 CWC25Q9NXE8 425 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 RIPOR2Q9Y4F9 1068 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 NID2Q14112 1375 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 MGRN1O60291 552 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 ZPR1O75312 459 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 EEF1GP26641 437 aaKnown RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 SLC8A1P32418 973 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 PTGDRQ13258 359 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 ANKRD13CQ8N6S4 541 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 OR2W6PQ8NHA6 318 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 TRIM47Q96LD4 638 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 TLR10Q9BXR5 811 aa13.09□□□□□ -0.31
VTI1A-205ENST00000483122 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 EPB41L4AQ9HCS5 686 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
VTI1A-205ENST00000483122 AFF2P51816 1311 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 ZNF532Q9HCE3 1301 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 NKRFO15226 690 aaKnown RBP eCLIP13.08□□□□□ -0.32
VTI1A-205ENST00000483122 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
VTI1A-205ENST00000483122 KRT2P35908 639 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 IL17AQ16552 155 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 TUBGCP2Q9BSJ2 902 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 USP21Q9UK80 565 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 TJP1Q07157 1748 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 ATP6V1G2O95670 118 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-205ENST00000483122 SARNPP82979 210 aaKnown RBP13.08□□□□□ -0.32
VTI1A-205ENST00000483122 WTAPQ15007 396 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-205ENST00000483122 C1orf131Q8NDD1 294 aaKnown RBP13.08□□□□□ -0.32
VTI1A-205ENST00000483122 ZNF483Q8TF39 744 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-205ENST00000483122 STAMBPL1Q96FJ0 436 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 UBAC1Q9BSL1 405 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 THAP9Q9H5L6 903 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 NOD2Q9HC29 1040 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 RMND1Q9NWS8 449 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-205ENST00000483122 SLC12A6Q9UHW9 1150 aa13.08□□□□□ -0.32
VTI1A-205ENST00000483122 CHD4Q14839 1912 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 CALRP27797 417 aaKnown RBP13.07□□□□□ -0.32
VTI1A-205ENST00000483122 DNA2P51530 1060 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 CDC37Q16543 378 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-205ENST00000483122 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 HVCN1Q96D96 273 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 NUP58Q9BVL2 599 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 CNOT8Q9UFF9 292 aaKnown RBP13.07□□□□□ -0.32
VTI1A-205ENST00000483122 BAIAP2L1Q9UHR4 511 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 WNK3Q9BYP7 1800 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 BUB1O43683 1085 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 EIF4A3P38919 411 aaKnown RBP13.07□□□□□ -0.32
VTI1A-205ENST00000483122 KIF11P52732 1056 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 SLC8A3P57103 927 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-205ENST00000483122 IFFO1Q0D2I5 559 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 ZKSCAN8Q15776 578 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-205ENST00000483122 PKN1Q16512 942 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 KLHDC7AQ5VTJ3 777 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 TOM1L2Q6ZVM7 507 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 CACNA2D3Q8IZS8 1091 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 THOC1Q96FV9 657 aaKnown RBP13.07□□□□□ -0.32
VTI1A-205ENST00000483122 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
VTI1A-205ENST00000483122 KRT12Q99456 494 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
VTI1A-205ENST00000483122 C5orf60A6NFR6 353 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 GCKP35557 465 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 CDK17Q00537 523 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 MAP2K1Q02750 393 aaPredicted RBP13.06□□□□□ -0.32
VTI1A-205ENST00000483122 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 IFNL3Q8IZI9 196 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 ZNF654Q8IZM8 581 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 ARFGAP2Q8N6H7 521 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 CCT6BQ92526 530 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms