RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ATP2A2P16615 1042 aaKnown RBP8.76□□□□□ -1.01
CSDE1-206ENST00000483030 TFF2Q03403 129 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 PPARAQ07869 468 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 TTLL4Q14679 1199 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 SKIV2LQ15477 1246 aaKnown RBP8.76□□□□□ -1.01
CSDE1-206ENST00000483030 C20orf194Q5TEA3 1177 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 RCSD1Q6JBY9 416 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 NSMFQ6X4W1 530 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 GPATCH3Q96I76 525 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 NAPBQ9H115 298 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 ALDH8A1Q9H2A2 487 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-206ENST00000483030 TSPYL2Q9H2G4 693 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-206ENST00000483030 INCENPQ9NQS7 918 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 STX8Q9UNK0 236 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 PCDHA11Q9Y5I1 949 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 PARP14Q460N5 1801 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 NMT2O60551 498 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 SUPT20HL2P0C7V6 817 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 BAATQ14032 418 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-206ENST00000483030 LRRFIP1Q32MZ4 808 aaKnown RBP8.75□□□□□ -1.01
CSDE1-206ENST00000483030 DUSP28Q4G0W2 176 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 RASGRP2Q7LDG7 609 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 DEFB128Q7Z7B8 93 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 DCTPP1Q9H773 170 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 CERS4Q9HA82 394 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 VTA1Q9NP79 307 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 IL17RBQ9NRM6 502 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 TRMT13Q9NUP7 481 aaKnown RBP8.75□□□□□ -1.01
CSDE1-206ENST00000483030 CCPG1Q9ULG6 757 aa8.75□□□□□ -1.01
CSDE1-206ENST00000483030 PLXNA1Q9UIW2 1896 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 PLIN4Q96Q06 1357 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 TSPY2A6NKD2 308 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 GABBR2O75899 941 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 MYL3P08590 195 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 SLC16A2P36021 539 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 KCNQ1P51787 676 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 CTDSPL2Q05D32 466 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 AAK1Q2M2I8 961 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 CCDC96Q2M329 555 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 FAM47CQ5HY64 1035 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 TMEM67Q5HYA8 995 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 PPP4R3BQ5MIZ7 849 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 TTBK2Q6IQ55 1244 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 MORC4Q8TE76 937 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 PPP1R13LQ8WUF5 828 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 WDR11Q9BZH6 1224 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 GPHNQ9NQX3 736 aaPredicted RBP8.74□□□□□ -1.01
CSDE1-206ENST00000483030 POLR3EQ9NVU0 708 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 RCAN3Q9UKA8 241 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 TNKSO95271 1327 aa8.74□□□□□ -1.01
CSDE1-206ENST00000483030 PTPDC1A2A3K4 754 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 NFIBO00712 420 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
CSDE1-206ENST00000483030 RANBP6O60518 1105 aaKnown RBP8.73□□□□□ -1.01
CSDE1-206ENST00000483030 ICAM1P05362 532 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 CA3P07451 260 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 PFKMP08237 780 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 ACTN1P12814 892 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 ALDH5A1P51649 535 aaPredicted RBP8.73□□□□□ -1.01
CSDE1-206ENST00000483030 PURAQ00577 322 aaKnown RBP8.73□□□□□ -1.01
CSDE1-206ENST00000483030 NBPF20Q3BBV1 942 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 ZMYM1Q5SVZ6 1142 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 OR6J1Q8NGC5 347 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 MTG1Q9BT17 334 aaPredicted RBP8.73□□□□□ -1.01
CSDE1-206ENST00000483030 FSD1Q9BTV5 496 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 ADD3Q9UEY8 706 aaKnown RBP8.73□□□□□ -1.01
CSDE1-206ENST00000483030 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.73□□□□□ -1.01
CSDE1-206ENST00000483030 MTCH2Q9Y6C9 303 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 MYH8P13535 1937 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 MUC3AQ02505 3323 aa8.73□□□□□ -1.01
CSDE1-206ENST00000483030 CHD9Q3L8U1 2897 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 GREB1LQ9C091 1923 aaPredicted RBP8.72□□□□□ -1.01
CSDE1-206ENST00000483030 RBM47A0AV96 593 aaKnown RBP8.72□□□□□ -1.01
CSDE1-206ENST00000483030 EPOPA6NHQ4 379 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 ERC2O15083 957 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 FOXP2O15409 715 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 IQCF3P0C7M6 154 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 POU3F3P20264 500 aaPredicted RBP8.72□□□□□ -1.01
CSDE1-206ENST00000483030 CALML3P27482 149 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 PLA2G5P39877 138 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 CPT1AP50416 773 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 CHMP4BP1P59074 171 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 SYDE2Q5VT97 1194 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 KRT40Q6A162 431 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 BTNL9Q6UXG8 535 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 RETREG2Q8NC44 543 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 PHOSPHO2Q8TCD6 241 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 OTUD7AQ8TE49 926 aaPredicted RBP8.72□□□□□ -1.01
CSDE1-206ENST00000483030 DCAF4Q8WV16 495 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 ARNTL2Q8WYA1 636 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 FAM122AQ96E09 287 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 C1QTNF1Q9BXJ1 281 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 FTOQ9C0B1 505 aaKnown RBP eCLIP8.72□□□□□ -1.01
CSDE1-206ENST00000483030 RANBP17Q9H2T7 1088 aaKnown RBP8.72□□□□□ -1.01
CSDE1-206ENST00000483030 GPCPD1Q9NPB8 672 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 TTC41PQ6P2S7 1318 aa8.72□□□□□ -1.01
CSDE1-206ENST00000483030 MYO9BQ13459 2157 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms