RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 XIRP1Q702N8 1843 aaKnown RBP13.8□□□□□ -0.2
CCDC78-213ENST00000482878 A0A1W2PQC6 194 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 PDE6BP35913 854 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 ITPK1Q13572 414 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 FKBP15Q5T1M5 1219 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 B4GALNT4Q76KP1 1039 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 PTF1AQ7RTS3 328 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 AGPAT5Q9NUQ2 364 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 MINPP1Q9UNW1 487 aa13.8□□□□□ -0.2
CCDC78-213ENST00000482878 PDS5AQ29RF7 1337 aaKnown RBP13.79□□□□□ -0.2
CCDC78-213ENST00000482878 SRCAPQ6ZRS2 3230 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 RCCD1A6NED2 376 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 B4DLN1 442 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 MCM3P25205 808 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 KLK7P49862 253 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 ATP1A2P50993 1020 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 USP14P54578 494 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 PPARDQ03181 441 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 E2F5Q15329 346 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 FMNL3Q8IVF7 1028 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 RASSF8Q8NHQ8 419 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 TRIM6Q9C030 488 aaPredicted RBP13.79□□□□□ -0.2
CCDC78-213ENST00000482878 EEF1GP26641 437 aaKnown RBP13.79□□□□□ -0.2
CCDC78-213ENST00000482878 PDCLQ13371 301 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 ERFEQ4G0M1 354 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 DTHD1Q6ZMT9 781 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 COG1Q8WTW3 980 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 GPR101Q96P66 508 aaPredicted RBP13.79□□□□□ -0.2
CCDC78-213ENST00000482878 LACRTQ9GZZ8 138 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 SAR1BQ9Y6B6 198 aa13.79□□□□□ -0.2
CCDC78-213ENST00000482878 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
CCDC78-213ENST00000482878 RASSF10A6NK89 507 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 EIF3HO15372 352 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 TTI2Q6NXR4 508 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 TMED8Q6PL24 325 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 RPSAP08865 295 aaKnown RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 CALML3P27482 149 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 GBP2P32456 591 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 TEX11Q8IYF3 940 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 THAP9Q9H5L6 903 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 VIPAS39Q9H9C1 493 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 BSDC1Q9NW68 430 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 GCFC2P16383 781 aaKnown RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 PRDX5P30044 214 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 KCNB1Q14721 858 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 TSR1Q2NL82 804 aaKnown RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 PAPD7Q5XG87 772 aaKnown RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 SND1Q7KZF4 910 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 ZNF526Q8TF50 670 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-213ENST00000482878 TTYH3Q9C0H2 523 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 DUSP10Q9Y6W6 482 aa13.78□□□□□ -0.2
CCDC78-213ENST00000482878 MYH8P13535 1937 aa13.77□□□□□ -0.2
CCDC78-213ENST00000482878 M0R2N6 131 aa13.77□□□□□ -0.2
CCDC78-213ENST00000482878 SKAP2O75563 359 aaPredicted RBP13.77□□□□□ -0.2
CCDC78-213ENST00000482878 KIF5BP33176 963 aa13.77□□□□□ -0.2
CCDC78-213ENST00000482878 MEA1Q16626 185 aa13.77□□□□□ -0.2
CCDC78-213ENST00000482878 FAM43BQ6ZT52 329 aaPredicted RBP13.77□□□□□ -0.2
CCDC78-213ENST00000482878 MICALCLQ6ZW33 695 aa13.77□□□□□ -0.2
CCDC78-213ENST00000482878 CELF1Q92879 486 aaKnown RBP13.77□□□□□ -0.2
CCDC78-213ENST00000482878 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.2
CCDC78-213ENST00000482878 CRNKL1Q9BZJ0 848 aaKnown RBP13.77□□□□□ -0.2
CCDC78-213ENST00000482878 IL17RBQ9NRM6 502 aa13.77□□□□□ -0.2
CCDC78-213ENST00000482878 KBTBD4Q9NVX7 518 aa13.77□□□□□ -0.2
CCDC78-213ENST00000482878 NKRFO15226 690 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC78-213ENST00000482878 RHOBTB3O94955 611 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 SRGNP10124 158 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 EZRP15311 586 aaKnown RBP13.77□□□□□ -0.21
CCDC78-213ENST00000482878 PEX19P40855 299 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 UBA7P41226 1012 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC78-213ENST00000482878 INF2Q27J81 1249 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 KIAA1328Q86T90 577 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 KLC4Q9NSK0 619 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 MCM8Q9UJA3 840 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 CCDC194A0A1B0GVG4 234 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 PSMA7O14818 248 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 ZNF185O15231 689 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 ATP2C2O75185 946 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 DNM2P50570 870 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 FBXO33Q7Z6M2 555 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 JAKMIP2Q96AA8 810 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 CALR3Q96L12 384 aaKnown RBP13.77□□□□□ -0.21
CCDC78-213ENST00000482878 CCDC114Q96M63 670 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 MAGEC2Q9UBF1 373 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-213ENST00000482878 PCDHA6Q9UN73 950 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 PCDHA8Q9Y5H6 950 aa13.77□□□□□ -0.21
CCDC78-213ENST00000482878 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
CCDC78-213ENST00000482878 GCKP35557 465 aa13.76□□□□□ -0.21
CCDC78-213ENST00000482878 KRT83P78385 493 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms