RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 DDX20Q9UHI6 824 aaKnown RBP19.2■□□□□ 0.66
HMGN1-214ENST00000482733 B4DLN1 442 aa19.19■□□□□ 0.66
HMGN1-214ENST00000482733 SNAI1O95863 264 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-214ENST00000482733 MRPL12P52815 198 aaKnown RBP19.19■□□□□ 0.66
HMGN1-214ENST00000482733 GHRHRQ02643 423 aa19.19■□□□□ 0.66
HMGN1-214ENST00000482733 SLC30A10Q6XR72 485 aa19.19■□□□□ 0.66
HMGN1-214ENST00000482733 DNERQ8NFT8 737 aa19.19■□□□□ 0.66
HMGN1-214ENST00000482733 ALDH8A1Q9H2A2 487 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-214ENST00000482733 NID2Q14112 1375 aa19.19■□□□□ 0.66
HMGN1-214ENST00000482733 TOB2Q14106 344 aaPredicted RBP19.18■□□□□ 0.66
HMGN1-214ENST00000482733 PRAMEF19Q5SWL8 479 aa19.18■□□□□ 0.66
HMGN1-214ENST00000482733 CMTR1Q8N1G2 835 aaKnown RBP19.18■□□□□ 0.66
HMGN1-214ENST00000482733 CCDC82Q8N4S0 544 aa19.18■□□□□ 0.66
HMGN1-214ENST00000482733 ANKLE1Q8NAG6 615 aa19.18■□□□□ 0.66
HMGN1-214ENST00000482733 PIBF1Q8WXW3 757 aa19.18■□□□□ 0.66
HMGN1-214ENST00000482733 SHISA4Q96DD7 197 aa19.18■□□□□ 0.66
HMGN1-214ENST00000482733 OGDHLQ9ULD0 1010 aa19.18■□□□□ 0.66
HMGN1-214ENST00000482733 RBBP6Q7Z6E9 1792 aaKnown RBP19.18■□□□□ 0.66
HMGN1-214ENST00000482733 ZNF865P0CJ78 1059 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-214ENST00000482733 ALDH5A1P51649 535 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-214ENST00000482733 ACVR2BQ13705 512 aa19.17■□□□□ 0.66
HMGN1-214ENST00000482733 ANKRD1Q15327 319 aa19.17■□□□□ 0.66
HMGN1-214ENST00000482733 LHX8Q68G74 356 aa19.17■□□□□ 0.66
HMGN1-214ENST00000482733 SYTL5Q8TDW5 730 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-214ENST00000482733 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
HMGN1-214ENST00000482733 ZNF274Q96GC6 653 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-214ENST00000482733 FAM217BQ9NTX9 383 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-214ENST00000482733 ZHX1Q9UKY1 873 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-214ENST00000482733 BRCA2P51587 3418 aa19.17■□□□□ 0.66
HMGN1-214ENST00000482733 CFBP00751 764 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 AKR1A1P14550 325 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 PDIA3P30101 505 aaKnown RBP19.16■□□□□ 0.66
HMGN1-214ENST00000482733 CDC27P30260 824 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 HSD17B4P51659 736 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 MLLT1Q03111 559 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-214ENST00000482733 FUT2Q10981 343 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 TBC1D5Q92609 795 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 PURBQ96QR8 312 aaKnown RBP19.16■□□□□ 0.66
HMGN1-214ENST00000482733 UPF2Q9HAU5 1272 aaKnown RBP19.16■□□□□ 0.66
HMGN1-214ENST00000482733 FAM184BQ9ULE4 1060 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 ASTN1O14525 1302 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 CNTNAP5Q8WYK1 1306 aa19.16■□□□□ 0.66
HMGN1-214ENST00000482733 ZNFX1Q9P2E3 1918 aaKnown RBP19.15■□□□□ 0.66
HMGN1-214ENST00000482733 KIAA0100Q14667 2235 aaKnown RBP19.15■□□□□ 0.66
HMGN1-214ENST00000482733 GCOM1H8Y6P7 765 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-214ENST00000482733 OPLAHO14841 1288 aa19.15■□□□□ 0.66
HMGN1-214ENST00000482733 POLR2MP0CAP2 368 aa19.15■□□□□ 0.66
HMGN1-214ENST00000482733 ADD1P35611 737 aaKnown RBP19.15■□□□□ 0.66
HMGN1-214ENST00000482733 NSUN6Q8TEA1 469 aaKnown RBP19.15■□□□□ 0.66
HMGN1-214ENST00000482733 VTA1Q9NP79 307 aa19.15■□□□□ 0.66
HMGN1-214ENST00000482733 RBM27Q9P2N5 1060 aaKnown RBP19.15■□□□□ 0.66
HMGN1-214ENST00000482733 hCG_1984214I3L0E3 225 aa19.14■□□□□ 0.65
HMGN1-214ENST00000482733 FARP2O94887 1054 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-214ENST00000482733 RARBP10826 455 aa19.14■□□□□ 0.65
HMGN1-214ENST00000482733 ZNF713Q8N859 430 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-214ENST00000482733 IWS1Q96ST2 819 aa19.14■□□□□ 0.65
HMGN1-214ENST00000482733 RMDN3Q96TC7 470 aa19.14■□□□□ 0.65
HMGN1-214ENST00000482733 C22orf23Q9BZE7 217 aa19.14■□□□□ 0.65
HMGN1-214ENST00000482733 KATNBL1Q9H079 304 aa19.14■□□□□ 0.65
HMGN1-214ENST00000482733 V9GY48 417 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-214ENST00000482733 PLXNA1Q9UIW2 1896 aa19.14■□□□□ 0.65
HMGN1-214ENST00000482733 EDNRBP24530 442 aa19.13■□□□□ 0.65
HMGN1-214ENST00000482733 PDE4DQ08499 809 aa19.13■□□□□ 0.65
HMGN1-214ENST00000482733 HEATR3Q7Z4Q2 680 aa19.13■□□□□ 0.65
HMGN1-214ENST00000482733 TEX2Q8IWB9 1127 aa19.13■□□□□ 0.65
HMGN1-214ENST00000482733 ARRDC4Q8NCT1 418 aa19.13■□□□□ 0.65
HMGN1-214ENST00000482733 CUL5Q93034 780 aa19.13■□□□□ 0.65
HMGN1-214ENST00000482733 TAAR1Q96RJ0 339 aa19.13■□□□□ 0.65
HMGN1-214ENST00000482733 hCG_1642624A0A1W2PR95 340 aa19.12■□□□□ 0.65
HMGN1-214ENST00000482733 IFNAR1P17181 557 aa19.12■□□□□ 0.65
HMGN1-214ENST00000482733 NEK4P51957 841 aa19.12■□□□□ 0.65
HMGN1-214ENST00000482733 AKAP17AQ02040 695 aaKnown RBP19.12■□□□□ 0.65
HMGN1-214ENST00000482733 CCDC144BQ3MJ40 725 aa19.12■□□□□ 0.65
HMGN1-214ENST00000482733 ARHGEF16Q5VV41 709 aa19.12■□□□□ 0.65
HMGN1-214ENST00000482733 PPP1R18Q6NYC8 613 aa19.12■□□□□ 0.65
HMGN1-214ENST00000482733 CPLX2Q6PUV4 134 aaKnown RBP19.12■□□□□ 0.65
HMGN1-214ENST00000482733 UBE2Q1Q7Z7E8 422 aa19.12■□□□□ 0.65
HMGN1-214ENST00000482733 COL20A1Q9P218 1284 aa19.12■□□□□ 0.65
HMGN1-214ENST00000482733 PIK3CDO00329 1044 aa19.11■□□□□ 0.65
HMGN1-214ENST00000482733 PRPF3O43395 683 aaKnown RBP19.11■□□□□ 0.65
HMGN1-214ENST00000482733 DUSP11O75319 330 aaKnown RBP19.11■□□□□ 0.65
HMGN1-214ENST00000482733 HOXA13P31271 388 aaPredicted RBP19.11■□□□□ 0.65
HMGN1-214ENST00000482733 RBM25P49756 843 aaKnown RBP19.11■□□□□ 0.65
HMGN1-214ENST00000482733 AK2P54819 239 aa19.11■□□□□ 0.65
HMGN1-214ENST00000482733 CCT2P78371 535 aaKnown RBP19.11■□□□□ 0.65
HMGN1-214ENST00000482733 IQSEC1Q6DN90 963 aa19.11■□□□□ 0.65
HMGN1-214ENST00000482733 NECAB2Q7Z6G3 386 aa19.11■□□□□ 0.65
HMGN1-214ENST00000482733 PSTPIP2Q9H939 334 aa19.11■□□□□ 0.65
HMGN1-214ENST00000482733 XPNPEP3Q9NQH7 507 aa19.11■□□□□ 0.65
HMGN1-214ENST00000482733 PXMP2Q9NR77 195 aa19.11■□□□□ 0.65
HMGN1-214ENST00000482733 SMCHD1A6NHR9 2005 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 DNM1LO00429 736 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 CPLX1O14810 134 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 STXBP2Q15833 593 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 NTRK3Q16288 839 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 PFKFB3Q16875 520 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-214ENST00000482733 ANO1Q5XXA6 986 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 WWC2Q6AWC2 1192 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 FBXO16Q8IX29 292 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-214ENST00000482733 SMARCC2Q8TAQ2 1214 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms