RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PDIA3P30101 505 aaKnown RBP24.18■■□□□ 1.46
SEC13-217ENST00000482647 RGS19P49795 217 aa24.18■■□□□ 1.46
SEC13-217ENST00000482647 ARMCX2Q7L311 632 aa24.18■■□□□ 1.46
SEC13-217ENST00000482647 PURBQ96QR8 312 aaKnown RBP24.18■■□□□ 1.46
SEC13-217ENST00000482647 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.18■■□□□ 1.46
SEC13-217ENST00000482647 LOC102724159A0A0B4J2E5 919 aa24.17■■□□□ 1.46
SEC13-217ENST00000482647 SEPT4O43236 478 aa24.17■■□□□ 1.46
SEC13-217ENST00000482647 CDC27P30260 824 aa24.17■■□□□ 1.46
SEC13-217ENST00000482647 ADD1P35611 737 aaKnown RBP24.17■■□□□ 1.46
SEC13-217ENST00000482647 PWP2Q15269 919 aaKnown RBP24.17■■□□□ 1.46
SEC13-217ENST00000482647 SAMD3Q8N6K7 520 aa24.17■■□□□ 1.46
SEC13-217ENST00000482647 TBC1D5Q92609 795 aa24.17■■□□□ 1.46
SEC13-217ENST00000482647 ZNF274Q96GC6 653 aaPredicted RBP24.17■■□□□ 1.46
SEC13-217ENST00000482647 MPHOSPH6Q99547 160 aaKnown RBP24.17■■□□□ 1.46
SEC13-217ENST00000482647 CRISPLD2Q9H0B8 497 aa24.17■■□□□ 1.46
SEC13-217ENST00000482647 UPF2Q9HAU5 1272 aaKnown RBP24.17■■□□□ 1.46
SEC13-217ENST00000482647 MAP3K20Q9NYL2 800 aaKnown RBP24.17■■□□□ 1.46
SEC13-217ENST00000482647 DDX20Q9UHI6 824 aaKnown RBP24.17■■□□□ 1.46
SEC13-217ENST00000482647 ZNFX1Q9P2E3 1918 aaKnown RBP24.17■■□□□ 1.46
SEC13-217ENST00000482647 CFBP00751 764 aa24.16■■□□□ 1.46
SEC13-217ENST00000482647 FUT2Q10981 343 aa24.16■■□□□ 1.46
SEC13-217ENST00000482647 ANKRD1Q15327 319 aa24.16■■□□□ 1.46
SEC13-217ENST00000482647 DNERQ8NFT8 737 aa24.16■■□□□ 1.46
SEC13-217ENST00000482647 SYTL5Q8TDW5 730 aaPredicted RBP24.16■■□□□ 1.46
SEC13-217ENST00000482647 C22orf23Q9BZE7 217 aa24.16■■□□□ 1.46
SEC13-217ENST00000482647 ABHD16BQ9H3Z7 469 aa24.16■■□□□ 1.46
SEC13-217ENST00000482647 V9GY48 417 aaPredicted RBP24.16■■□□□ 1.46
SEC13-217ENST00000482647 NID2Q14112 1375 aa24.16■■□□□ 1.46
SEC13-217ENST00000482647 hCG_1642624A0A1W2PR95 340 aa24.15■■□□□ 1.46
SEC13-217ENST00000482647 B4DLN1 442 aa24.15■■□□□ 1.46
SEC13-217ENST00000482647 OPLAHO14841 1288 aa24.15■■□□□ 1.46
SEC13-217ENST00000482647 ZNF865P0CJ78 1059 aaPredicted RBP24.15■■□□□ 1.46
SEC13-217ENST00000482647 ALDH5A1P51649 535 aaPredicted RBP24.15■■□□□ 1.46
SEC13-217ENST00000482647 MRPL12P52815 198 aaKnown RBP24.15■■□□□ 1.46
SEC13-217ENST00000482647 GHRHRQ02643 423 aa24.15■■□□□ 1.46
SEC13-217ENST00000482647 ACVR2BQ13705 512 aa24.15■■□□□ 1.46
SEC13-217ENST00000482647 LHX8Q68G74 356 aa24.15■■□□□ 1.46
SEC13-217ENST00000482647 LARP6Q9BRS8 491 aaKnown RBP24.15■■□□□ 1.46
SEC13-217ENST00000482647 ASTN1O14525 1302 aa24.14■■□□□ 1.46
SEC13-217ENST00000482647 CNTNAP5Q8WYK1 1306 aa24.14■■□□□ 1.46
SEC13-217ENST00000482647 SMCHD1A6NHR9 2005 aa24.14■■□□□ 1.45
SEC13-217ENST00000482647 GCOM1H8Y6P7 765 aaPredicted RBP24.14■■□□□ 1.45
SEC13-217ENST00000482647 POLR2MP0CAP2 368 aa24.14■■□□□ 1.45
SEC13-217ENST00000482647 HSD17B4P51659 736 aa24.14■■□□□ 1.45
SEC13-217ENST00000482647 NEK4P51957 841 aa24.14■■□□□ 1.45
SEC13-217ENST00000482647 MORC4Q8TE76 937 aa24.14■■□□□ 1.45
SEC13-217ENST00000482647 SHISA4Q96DD7 197 aa24.14■■□□□ 1.45
SEC13-217ENST00000482647 BAZ2BQ9UIF8 2168 aaKnown RBP24.14■■□□□ 1.45
SEC13-217ENST00000482647 ZHX1Q9UKY1 873 aaPredicted RBP24.14■■□□□ 1.45
SEC13-217ENST00000482647 OGDHLQ9ULD0 1010 aa24.14■■□□□ 1.45
SEC13-217ENST00000482647 CCT2P78371 535 aaKnown RBP24.13■■□□□ 1.45
SEC13-217ENST00000482647 HEATR3Q7Z4Q2 680 aa24.13■■□□□ 1.45
SEC13-217ENST00000482647 NSUN6Q8TEA1 469 aaKnown RBP24.13■■□□□ 1.45
SEC13-217ENST00000482647 RMDN3Q96TC7 470 aa24.13■■□□□ 1.45
SEC13-217ENST00000482647 FAM184BQ9ULE4 1060 aa24.13■■□□□ 1.45
SEC13-217ENST00000482647 AKR1A1P14550 325 aa24.12■■□□□ 1.45
SEC13-217ENST00000482647 RBM25P49756 843 aaKnown RBP24.12■■□□□ 1.45
SEC13-217ENST00000482647 ANKLE1Q8NAG6 615 aa24.12■■□□□ 1.45
SEC13-217ENST00000482647 TAAR1Q96RJ0 339 aa24.12■■□□□ 1.45
SEC13-217ENST00000482647 COL20A1Q9P218 1284 aa24.12■■□□□ 1.45
SEC13-217ENST00000482647 RBM27Q9P2N5 1060 aaKnown RBP24.12■■□□□ 1.45
SEC13-217ENST00000482647 HOXA13P31271 388 aaPredicted RBP24.11■■□□□ 1.45
SEC13-217ENST00000482647 AK2P54819 239 aa24.11■■□□□ 1.45
SEC13-217ENST00000482647 AKAP17AQ02040 695 aaKnown RBP24.11■■□□□ 1.45
SEC13-217ENST00000482647 PDE4DQ08499 809 aa24.11■■□□□ 1.45
SEC13-217ENST00000482647 IWS1Q96ST2 819 aa24.11■■□□□ 1.45
SEC13-217ENST00000482647 KATNBL1Q9H079 304 aa24.11■■□□□ 1.45
SEC13-217ENST00000482647 NCOA5Q9HCD5 579 aaKnown RBP24.11■■□□□ 1.45
SEC13-217ENST00000482647 CPLX1O14810 134 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 PRPF3O43395 683 aaKnown RBP24.1■■□□□ 1.45
SEC13-217ENST00000482647 RARBP10826 455 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 STK3Q13188 491 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 CCDC144BQ3MJ40 725 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 ARHGEF16Q5VV41 709 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 CUL5Q93034 780 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 PSTPIP2Q9H939 334 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 VTA1Q9NP79 307 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 TPCN1Q9ULQ1 816 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 DDX49Q9Y6V7 483 aaKnown RBP24.1■■□□□ 1.45
SEC13-217ENST00000482647 PLXNA1Q9UIW2 1896 aa24.1■■□□□ 1.45
SEC13-217ENST00000482647 MKI67P46013 3256 aaKnown RBP24.09■■□□□ 1.45
SEC13-217ENST00000482647 hCG_1984214I3L0E3 225 aa24.09■■□□□ 1.45
SEC13-217ENST00000482647 FARP2O94887 1054 aaPredicted RBP24.09■■□□□ 1.45
SEC13-217ENST00000482647 IFNAR1P17181 557 aa24.09■■□□□ 1.45
SEC13-217ENST00000482647 EDNRBP24530 442 aa24.09■■□□□ 1.45
SEC13-217ENST00000482647 NTRK3Q16288 839 aa24.09■■□□□ 1.45
SEC13-217ENST00000482647 CPLX2Q6PUV4 134 aaKnown RBP24.09■■□□□ 1.45
SEC13-217ENST00000482647 ZNF713Q8N859 430 aaPredicted RBP24.09■■□□□ 1.45
SEC13-217ENST00000482647 GPKOWQ92917 476 aaPredicted RBP eCLIP24.09■■□□□ 1.451e-12■□□□□ 8.8
SEC13-217ENST00000482647 SLKQ9H2G2 1235 aaPredicted RBP24.09■■□□□ 1.45
SEC13-217ENST00000482647 PIK3CDO00329 1044 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 MLLT1Q03111 559 aaPredicted RBP24.08■■□□□ 1.45
SEC13-217ENST00000482647 PFKFB3Q16875 520 aaPredicted RBP24.08■■□□□ 1.45
SEC13-217ENST00000482647 ANO1Q5XXA6 986 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 WWC2Q6AWC2 1192 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 EEPD1Q7L9B9 569 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 FCHSD1Q86WN1 690 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 ARRDC4Q8NCT1 418 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 SMARCC2Q8TAQ2 1214 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 PHKBQ93100 1093 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms