RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 PDLIM7Q9NR12 457 aa23.16■■□□□ 1.3
MSH5-215ENST00000482280 TMEM39AQ9NV64 488 aa23.16■■□□□ 1.3
MSH5-215ENST00000482280 Q9Y3F1 56 aa23.16■■□□□ 1.3
MSH5-215ENST00000482280 SMCHD1A6NHR9 2005 aa23.16■■□□□ 1.3
MSH5-215ENST00000482280 ASTN1O14525 1302 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 A0A0U1RQG5 324 aaPredicted RBP23.15■■□□□ 1.3
MSH5-215ENST00000482280 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.15■■□□□ 1.3
MSH5-215ENST00000482280 MYADML2A6NDP7 307 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 TLR3O15455 904 aaKnown RBP23.15■■□□□ 1.3
MSH5-215ENST00000482280 ADCY6O43306 1168 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 CABYRO75952 493 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 RAG1P15918 1043 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 BRDTQ58F21 947 aaPredicted RBP23.15■■□□□ 1.3
MSH5-215ENST00000482280 BMP2KLQ5H9B9 411 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 MORC4Q8TE76 937 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 JMJD4Q9H9V9 463 aa23.15■■□□□ 1.3
MSH5-215ENST00000482280 NEFLP07196 543 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 SMPD1P17405 629 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 BEX3Q00994 111 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 RNF20Q5VTR2 975 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 CCSAPQ6IQ19 270 aaPredicted RBP23.14■■□□□ 1.29
MSH5-215ENST00000482280 CHST3Q7LGC8 479 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 TOX2Q96NM4 488 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 ESYT1Q9BSJ8 1104 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 WDR11Q9BZH6 1224 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 PDGFCQ9NRA1 345 aa23.14■■□□□ 1.29
MSH5-215ENST00000482280 GNEQ9Y223 722 aaKnown RBP23.14■■□□□ 1.29
MSH5-215ENST00000482280 DDX49Q9Y6V7 483 aaKnown RBP23.14■■□□□ 1.29
MSH5-215ENST00000482280 TRIOBPQ9H2D6 2365 aa23.13■■□□□ 1.29
MSH5-215ENST00000482280 PPP2R5BQ15173 497 aa23.13■■□□□ 1.29
MSH5-215ENST00000482280 LRIT3Q3SXY7 679 aa23.13■■□□□ 1.29
MSH5-215ENST00000482280 TAPT1Q6NXT6 567 aa23.13■■□□□ 1.29
MSH5-215ENST00000482280 NFXL1Q6ZNB6 911 aa23.13■■□□□ 1.29
MSH5-215ENST00000482280 ANKRD33Q7Z3H0 272 aa23.13■■□□□ 1.29
MSH5-215ENST00000482280 STAG2Q8N3U4 1231 aa23.13■■□□□ 1.29
MSH5-215ENST00000482280 NSUN6Q8TEA1 469 aaKnown RBP23.13■■□□□ 1.29
MSH5-215ENST00000482280 BADQ92934 168 aa23.13■■□□□ 1.29
MSH5-215ENST00000482280 GPHNQ9NQX3 736 aaPredicted RBP23.13■■□□□ 1.29
MSH5-215ENST00000482280 ZBTB5O15062 677 aa23.12■■□□□ 1.29
MSH5-215ENST00000482280 MCM5P33992 734 aa23.12■■□□□ 1.29
MSH5-215ENST00000482280 GRM4Q14833 912 aa23.12■■□□□ 1.29
MSH5-215ENST00000482280 DUSP28Q4G0W2 176 aa23.12■■□□□ 1.29
MSH5-215ENST00000482280 HOMER1Q86YM7 354 aa23.12■■□□□ 1.29
MSH5-215ENST00000482280 SCFD2Q8WU76 684 aa23.12■■□□□ 1.29
MSH5-215ENST00000482280 MAD2L2Q9UI95 211 aa23.12■■□□□ 1.29
MSH5-215ENST00000482280 MCM3APO60318 1980 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 ARVCFO00192 962 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 NKRFO15226 690 aaKnown RBP eCLIP23.11■■□□□ 1.29
MSH5-215ENST00000482280 CFBP00751 764 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 KIF5BP33176 963 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 CPT1AP50416 773 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 NKX3-2P78367 333 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 CXCL17Q6UXB2 119 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 SH3RF1Q7Z6J0 888 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 TMTC2Q8N394 836 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 CTCFLQ8NI51 663 aaPredicted RBP23.11■■□□□ 1.29
MSH5-215ENST00000482280 SEZ6LQ9BYH1 1024 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 PCDHA1Q9Y5I3 950 aa23.11■■□□□ 1.29
MSH5-215ENST00000482280 TRIM43BA6NCK2 446 aa23.1■■□□□ 1.29
MSH5-215ENST00000482280 PALM3A6NDB9 673 aaPredicted RBP23.1■■□□□ 1.29
MSH5-215ENST00000482280 CCDC69A6NI79 296 aa23.1■■□□□ 1.29
MSH5-215ENST00000482280 IRX5P78411 483 aaPredicted RBP23.1■■□□□ 1.29
MSH5-215ENST00000482280 ARHGEF16Q5VV41 709 aa23.1■■□□□ 1.29
MSH5-215ENST00000482280 STOX1Q6ZVD7 989 aa23.1■■□□□ 1.29
MSH5-215ENST00000482280 OR6J1Q8NGC5 347 aa23.1■■□□□ 1.29
MSH5-215ENST00000482280 TRIM43Q96BQ3 446 aaPredicted RBP23.1■■□□□ 1.29
MSH5-215ENST00000482280 RMDN3Q96TC7 470 aa23.1■■□□□ 1.29
MSH5-215ENST00000482280 MTA3Q9BTC8 594 aa23.1■■□□□ 1.29
MSH5-215ENST00000482280 KIAA0355O15063 1070 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 PRC1O43663 620 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 TTLL4Q14679 1199 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 STXBP2Q15833 593 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 MB21D2Q8IYB1 491 aaPredicted RBP23.09■■□□□ 1.29
MSH5-215ENST00000482280 SYTL5Q8TDW5 730 aaPredicted RBP23.09■■□□□ 1.29
MSH5-215ENST00000482280 LRCH3Q96II8 777 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 TMEM87BQ96K49 555 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 IWS1Q96ST2 819 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 LSG1Q9H089 658 aaKnown RBP23.09■■□□□ 1.29
MSH5-215ENST00000482280 POLR3EQ9NVU0 708 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 TAF6LQ9Y6J9 622 aa23.09■■□□□ 1.29
MSH5-215ENST00000482280 SOX1O00570 391 aaPredicted RBP23.08■■□□□ 1.29
MSH5-215ENST00000482280 SLC27A2O14975 620 aa23.08■■□□□ 1.29
MSH5-215ENST00000482280 CDC45O75419 566 aa23.08■■□□□ 1.29
MSH5-215ENST00000482280 TXNP10599 105 aaKnown RBP23.08■■□□□ 1.29
MSH5-215ENST00000482280 EDNRBP24530 442 aa23.08■■□□□ 1.29
MSH5-215ENST00000482280 FAAP100Q0VG06 881 aa23.08■■□□□ 1.29
MSH5-215ENST00000482280 MAP3K20Q9NYL2 800 aaKnown RBP23.08■■□□□ 1.29
MSH5-215ENST00000482280 CTAGE5O15320 804 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 DDAH1O94760 285 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 FPGSQ05932 587 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 ITGA7Q13683 1181 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 CREB3L3Q68CJ9 461 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 GPR153Q6NV75 609 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 SAMD3Q8N6K7 520 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 IGDCC4Q8TDY8 1250 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 TAAR1Q96RJ0 339 aa23.07■■□□□ 1.28
MSH5-215ENST00000482280 SEC63Q9UGP8 760 aaKnown RBP23.07■■□□□ 1.28
MSH5-215ENST00000482280 RBM47A0AV96 593 aaKnown RBP23.06■■□□□ 1.28
MSH5-215ENST00000482280 MYL3P08590 195 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms