RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 SCRN1Q12765 414 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 TRAF1Q13077 416 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 RABEP1Q15276 862 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 NTRK3Q16288 839 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 ME3Q16798 604 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 PRAMEF19Q5SWL8 479 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 MCF2L2Q86YR7 1114 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 NECAB1Q8N987 351 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 TINF2Q9BSI4 451 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 SLC26A6Q9BXS9 759 aa20.1■□□□□ 0.81
DDR1-243ENST00000482050 ASTN1O14525 1302 aa20.09■□□□□ 0.81
DDR1-243ENST00000482050 PFKFB2O60825 505 aa20.09■□□□□ 0.81
DDR1-243ENST00000482050 HOXA13P31271 388 aaPredicted RBP20.09■□□□□ 0.81
DDR1-243ENST00000482050 WWC2Q6AWC2 1192 aa20.09■□□□□ 0.81
DDR1-243ENST00000482050 RNF208Q9H0X6 261 aa20.09■□□□□ 0.81
DDR1-243ENST00000482050 IGHA2P01877 340 aa20.08■□□□□ 0.81
DDR1-243ENST00000482050 IFNAR1P17181 557 aa20.08■□□□□ 0.81
DDR1-243ENST00000482050 CCND3P30281 292 aaPredicted RBP20.08■□□□□ 0.81
DDR1-243ENST00000482050 SOX10P56693 466 aa20.08■□□□□ 0.81
DDR1-243ENST00000482050 AKAP17AQ02040 695 aaKnown RBP20.08■□□□□ 0.81
DDR1-243ENST00000482050 RGS22Q8NE09 1264 aa20.08■□□□□ 0.81
DDR1-243ENST00000482050 SYTL5Q8TDW5 730 aaPredicted RBP20.08■□□□□ 0.81
DDR1-243ENST00000482050 COL20A1Q9P218 1284 aa20.08■□□□□ 0.81
DDR1-243ENST00000482050 PRPF3O43395 683 aaKnown RBP20.07■□□□□ 0.8
DDR1-243ENST00000482050 CNGA1P29973 690 aa20.07■□□□□ 0.8
DDR1-243ENST00000482050 NAPAP54920 295 aa20.07■□□□□ 0.8
DDR1-243ENST00000482050 MAP3K21Q5TCX8 1036 aa20.07■□□□□ 0.8
DDR1-243ENST00000482050 CPLX2Q6PUV4 134 aaKnown RBP20.07■□□□□ 0.8
DDR1-243ENST00000482050 ARMCX2Q7L311 632 aa20.07■□□□□ 0.8
DDR1-243ENST00000482050 ZNF467Q7Z7K2 595 aaPredicted RBP20.07■□□□□ 0.8
DDR1-243ENST00000482050 TRPV1Q8NER1 839 aa20.07■□□□□ 0.8
DDR1-243ENST00000482050 TAAR1Q96RJ0 339 aa20.07■□□□□ 0.8
DDR1-243ENST00000482050 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.07■□□□□ 0.89e-6■■■■■ 32.4
DDR1-243ENST00000482050 HMX1Q9NP08 348 aaPredicted RBP20.07■□□□□ 0.8
DDR1-243ENST00000482050 LCTP09848 1927 aa20.07■□□□□ 0.8
DDR1-243ENST00000482050 RPTORQ8N122 1335 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 GCOM1H8Y6P7 765 aaPredicted RBP20.06■□□□□ 0.8
DDR1-243ENST00000482050 SNAI1O95863 264 aaPredicted RBP20.06■□□□□ 0.8
DDR1-243ENST00000482050 POLR2MP0CAP2 368 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 SCG2P13521 617 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 ALDH5A1P51649 535 aaPredicted RBP20.06■□□□□ 0.8
DDR1-243ENST00000482050 HSD17B4P51659 736 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 SSRP1Q08945 709 aaKnown RBP20.06■□□□□ 0.8
DDR1-243ENST00000482050 PFKFB3Q16875 520 aaPredicted RBP20.06■□□□□ 0.8
DDR1-243ENST00000482050 TYW1BQ6NUM6 668 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 MAMDC4Q6UXC1 1216 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 FCHSD1Q86WN1 690 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 TMEM106CQ9BVX2 250 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.06■□□□□ 0.8
DDR1-243ENST00000482050 ADD3Q9UEY8 706 aaKnown RBP20.06■□□□□ 0.8
DDR1-243ENST00000482050 LIMCH1Q9UPQ0 1083 aa20.06■□□□□ 0.8
DDR1-243ENST00000482050 RBBP6Q7Z6E9 1792 aaKnown RBP20.06■□□□□ 0.8
DDR1-243ENST00000482050 SYNGAP1Q96PV0 1343 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 POTEFA5A3E0 1075 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 STXBP3O00186 592 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 CYBAP13498 195 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 PKN1Q16512 942 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 USP17L6PQ6QN14 398 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 EEPD1Q7L9B9 569 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 TRIM22Q8IYM9 498 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 GTF3C6Q969F1 213 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 DEFB118Q96PH6 123 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 RNF26Q9BY78 433 aaPredicted RBP20.05■□□□□ 0.8
DDR1-243ENST00000482050 ZHX1Q9UKY1 873 aaPredicted RBP20.05■□□□□ 0.8
DDR1-243ENST00000482050 CNPY2Q9Y2B0 182 aa20.05■□□□□ 0.8
DDR1-243ENST00000482050 ASB14A6NK59 587 aa20.04■□□□□ 0.8
DDR1-243ENST00000482050 ST18O60284 1047 aa20.04■□□□□ 0.8
DDR1-243ENST00000482050 MSL3Q8N5Y2 521 aaKnown RBP20.04■□□□□ 0.8
DDR1-243ENST00000482050 PSTPIP2Q9H939 334 aa20.04■□□□□ 0.8
DDR1-243ENST00000482050 BARHL2Q9NY43 387 aa20.04■□□□□ 0.8
DDR1-243ENST00000482050 RBM27Q9P2N5 1060 aaKnown RBP20.04■□□□□ 0.8
DDR1-243ENST00000482050 CDKL5O76039 1030 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 CD2BP2O95400 341 aaKnown RBP20.03■□□□□ 0.8
DDR1-243ENST00000482050 CTDNEP1O95476 244 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 EIF2AK2P19525 551 aaKnown RBP20.03■□□□□ 0.8
DDR1-243ENST00000482050 ST3GAL1Q11201 340 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 UBE2SQ16763 222 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 ANO1Q5XXA6 986 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 DNERQ8NFT8 737 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 SMARCC2Q8TAQ2 1214 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 CUL5Q93034 780 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 RMDN3Q96TC7 470 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 PAK6Q9NQU5 681 aaPredicted RBP20.03■□□□□ 0.8
DDR1-243ENST00000482050 MCM3APO60318 1980 aa20.03■□□□□ 0.8
DDR1-243ENST00000482050 hCG_1984214I3L0E3 225 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 ZNF865P0CJ78 1059 aaPredicted RBP20.02■□□□□ 0.8
DDR1-243ENST00000482050 GHRHRQ02643 423 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 PDE4DQ08499 809 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 ACVR2BQ13705 512 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 ARHGEF16Q5VV41 709 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 CCDC83Q8IWF9 413 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 FBXO16Q8IX29 292 aaPredicted RBP20.02■□□□□ 0.8
DDR1-243ENST00000482050 ZNF713Q8N859 430 aaPredicted RBP20.02■□□□□ 0.8
DDR1-243ENST00000482050 NSUN6Q8TEA1 469 aaKnown RBP20.02■□□□□ 0.8
DDR1-243ENST00000482050 AIFM3Q96NN9 605 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 MAF1Q9H063 256 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 VPS54Q9P1Q0 977 aa20.02■□□□□ 0.8
DDR1-243ENST00000482050 CENPFP49454 3210 aa20.02■□□□□ 0.79
DDR1-243ENST00000482050 SMCO2A6NFE2 343 aa20.01■□□□□ 0.79
DDR1-243ENST00000482050 MEIS2O14770 477 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms