RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 STAT2P52630 851 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 LEXMQ3ZCV2 418 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 SLFN13Q68D06 897 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 CEP95Q96GE4 821 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 MTG1Q9BT17 334 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-224ENST00000481929 ZBED2Q9BTP6 218 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 TANC1Q9C0D5 1861 aa17.83■□□□□ 0.44
HDAC6-224ENST00000481929 LCHNA4D1U4 455 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 MINDY4BA8MYZ0 360 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 TTLL1O95922 423 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 KCNA5P22460 613 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 BFSP2Q13515 415 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 ZSCAN25Q6NSZ9 544 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 FAM160B2Q86V87 743 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 ZNF444Q8N0Y2 327 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-224ENST00000481929 CHURC1Q8WUH1 139 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 PUS7LQ9H0K6 701 aaKnown RBP17.82■□□□□ 0.44
HDAC6-224ENST00000481929 KCNH6Q9H252 994 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 MTMR4Q9NYA4 1195 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 CYP39A1Q9NYL5 469 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 NOD1Q9Y239 953 aa17.82■□□□□ 0.44
HDAC6-224ENST00000481929 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-224ENST00000481929 NBPF20Q3BBV1 942 aa17.81■□□□□ 0.44
HDAC6-224ENST00000481929 BRDTQ58F21 947 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-224ENST00000481929 OR6J1Q8NGC5 347 aa17.81■□□□□ 0.44
HDAC6-224ENST00000481929 HAUS7Q99871 368 aa17.81■□□□□ 0.44
HDAC6-224ENST00000481929 WDR11Q9BZH6 1224 aa17.81■□□□□ 0.44
HDAC6-224ENST00000481929 ZNF287Q9HBT7 754 aa17.81■□□□□ 0.44
HDAC6-224ENST00000481929 TET1Q8NFU7 2136 aa17.81■□□□□ 0.44
HDAC6-224ENST00000481929 MYH7P12883 1935 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 RLBP1P12271 317 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 IL9P15248 144 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 ATP5JP18859 108 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 WDR5P61964 334 aaKnown RBP17.8■□□□□ 0.44
HDAC6-224ENST00000481929 LRRFIP1Q32MZ4 808 aaKnown RBP17.8■□□□□ 0.44
HDAC6-224ENST00000481929 PTCRAQ6ISU1 281 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-224ENST00000481929 NFRKBQ6P4R8 1299 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 GIMAP6Q6P9H5 292 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 NSMFQ6X4W1 530 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-224ENST00000481929 MORC4Q8TE76 937 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 FBXL18Q96ME1 805 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 TGS1Q96RS0 853 aaKnown RBP17.8■□□□□ 0.44
HDAC6-224ENST00000481929 MTUS1Q9ULD2 1270 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
HDAC6-224ENST00000481929 RAD50Q92878 1312 aa17.79■□□□□ 0.44
HDAC6-224ENST00000481929 DCXO43602 365 aa17.79■□□□□ 0.44
HDAC6-224ENST00000481929 PRDM1O75626 825 aa17.79■□□□□ 0.44
HDAC6-224ENST00000481929 PTPN11Q06124 597 aaPredicted RBP17.79■□□□□ 0.44
HDAC6-224ENST00000481929 MUM1L1Q5H9M0 696 aa17.79■□□□□ 0.44
HDAC6-224ENST00000481929 CCDC155Q8N6L0 562 aa17.79■□□□□ 0.44
HDAC6-224ENST00000481929 STAG1Q8WVM7 1258 aa17.79■□□□□ 0.44
HDAC6-224ENST00000481929 STRBPQ96SI9 672 aaKnown RBP17.79■□□□□ 0.44
HDAC6-224ENST00000481929 SUGCTQ9HAC7 445 aa17.79■□□□□ 0.44
HDAC6-224ENST00000481929 GSG1L2A8MUP6 293 aa17.78■□□□□ 0.44
HDAC6-224ENST00000481929 SLC1A4P43007 532 aa17.78■□□□□ 0.44
HDAC6-224ENST00000481929 ERVK-21P61565 698 aa17.78■□□□□ 0.44
HDAC6-224ENST00000481929 TMCO2Q7Z6W1 182 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-224ENST00000481929 PPP1R13LQ8WUF5 828 aa17.78■□□□□ 0.44
HDAC6-224ENST00000481929 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
HDAC6-224ENST00000481929 ADD3Q9UEY8 706 aaKnown RBP17.78■□□□□ 0.44
HDAC6-224ENST00000481929 PTPRSQ13332 1948 aa17.78■□□□□ 0.44
HDAC6-224ENST00000481929 KPNA6O60684 536 aa17.77■□□□□ 0.44
HDAC6-224ENST00000481929 DEFB103AP81534 67 aa17.77■□□□□ 0.44
HDAC6-224ENST00000481929 PUS10Q3MIT2 529 aaKnown RBP17.77■□□□□ 0.44
HDAC6-224ENST00000481929 CAGE1Q8TC20 777 aa17.77■□□□□ 0.44
HDAC6-224ENST00000481929 PURBQ96QR8 312 aaKnown RBP17.77■□□□□ 0.44
HDAC6-224ENST00000481929 CRBNQ96SW2 442 aa17.77■□□□□ 0.44
HDAC6-224ENST00000481929 RAD9AQ99638 391 aa17.77■□□□□ 0.44
HDAC6-224ENST00000481929 CCPG1Q9ULG6 757 aa17.77■□□□□ 0.44
HDAC6-224ENST00000481929 PLIN4Q96Q06 1357 aa17.77■□□□□ 0.43
HDAC6-224ENST00000481929 LOC102724159A0A0B4J2E5 919 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 RBM47A0AV96 593 aaKnown RBP17.76■□□□□ 0.43
HDAC6-224ENST00000481929 LINC01553A4QN01 128 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 GRXCR2A6NFK2 248 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 PLA2G6O60733 806 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 GJB5O95377 273 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 TSPY3P0CV98 308 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 TSPY8P0CW00 308 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 TDO2P48775 406 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 ALDH5A1P51649 535 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-224ENST00000481929 SNAP25P60880 206 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 PPP2R5BQ15173 497 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 PWP2Q15269 919 aaKnown RBP17.76■□□□□ 0.43
HDAC6-224ENST00000481929 AFAP1L1Q8TED9 768 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 CHMP4CQ96CF2 233 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 LCTP09848 1927 aa17.76■□□□□ 0.43
HDAC6-224ENST00000481929 NKRFO15226 690 aaKnown RBP eCLIP17.75■□□□□ 0.43
HDAC6-224ENST00000481929 RAB11FIP3O75154 756 aa17.75■□□□□ 0.43
HDAC6-224ENST00000481929 MCCP23508 829 aa17.75■□□□□ 0.43
HDAC6-224ENST00000481929 PTGISQ16647 500 aa17.75■□□□□ 0.43
HDAC6-224ENST00000481929 CNKSR3Q6P9H4 555 aa17.75■□□□□ 0.43
HDAC6-224ENST00000481929 NEDD1Q8NHV4 660 aa17.75■□□□□ 0.43
HDAC6-224ENST00000481929 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 A6NJR5 290 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 HMMRO75330 724 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 PARNO95453 639 aaKnown RBP17.74■□□□□ 0.43
HDAC6-224ENST00000481929 SELPP16109 830 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 CHMP4BP1P59074 171 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 BAATQ14032 418 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms