RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 STAT6P42226 847 aa17.8■□□□□ 0.44
RXRA-202ENST00000481739 FANCCQ00597 558 aa17.8■□□□□ 0.44
RXRA-202ENST00000481739 KRT26Q7Z3Y9 468 aa17.8■□□□□ 0.44
RXRA-202ENST00000481739 CCDC84Q86UT8 332 aaPredicted RBP17.8■□□□□ 0.44
RXRA-202ENST00000481739 TBCKQ8TEA7 893 aa17.8■□□□□ 0.44
RXRA-202ENST00000481739 WRNIP1Q96S55 665 aa17.8■□□□□ 0.44
RXRA-202ENST00000481739 GTPBP4Q9BZE4 634 aaKnown RBP17.8■□□□□ 0.44
RXRA-202ENST00000481739 HSD3B7Q9H2F3 369 aa17.8■□□□□ 0.44
RXRA-202ENST00000481739 TAF1DQ9H5J8 278 aaPredicted RBP17.8■□□□□ 0.44
RXRA-202ENST00000481739 SCN4AP35499 1836 aa17.8■□□□□ 0.44
RXRA-202ENST00000481739 NDUFB10O96000 172 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 AFMP43652 599 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 ZYXQ15942 572 aaKnown RBP17.79■□□□□ 0.44
RXRA-202ENST00000481739 LETM2Q2VYF4 491 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 TTBK2Q6IQ55 1244 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 DLK2Q6UY11 383 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 CCDC150Q8NCX0 1101 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 XPO4Q9C0E2 1151 aaKnown RBP17.79■□□□□ 0.44
RXRA-202ENST00000481739 TMEM60Q9H2L4 133 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 SH2D4AQ9H788 454 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 GOPCQ9HD26 462 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 IFNKQ9P0W0 207 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 NRDCO43847 1150 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 GCFC2P16383 781 aaKnown RBP17.79■□□□□ 0.44
RXRA-202ENST00000481739 SLC16A2P36021 539 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 IKQ13123 557 aaPredicted RBP17.79■□□□□ 0.44
RXRA-202ENST00000481739 LRRC8AQ8IWT6 810 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 GRAMD1CQ8IYS0 662 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 SPICE1Q8N0Z3 855 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 ZC3H15Q8WU90 426 aaKnown RBP17.79■□□□□ 0.44
RXRA-202ENST00000481739 NUP88Q99567 741 aaPredicted RBP17.79■□□□□ 0.44
RXRA-202ENST00000481739 FEZ1Q99689 392 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 RAB34Q9BZG1 259 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 CLEC11AQ9Y240 323 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 TMX2Q9Y320 296 aa17.79■□□□□ 0.44
RXRA-202ENST00000481739 SERPINC1P01008 464 aa17.78■□□□□ 0.44
RXRA-202ENST00000481739 TRAF1Q13077 416 aa17.78■□□□□ 0.44
RXRA-202ENST00000481739 RRAGBQ5VZM2 374 aa17.78■□□□□ 0.44
RXRA-202ENST00000481739 PPP4R3AQ6IN85 833 aa17.78■□□□□ 0.44
RXRA-202ENST00000481739 ZKSCAN4Q969J2 545 aaPredicted RBP17.78■□□□□ 0.44
RXRA-202ENST00000481739 GINM1Q9NU53 330 aa17.78■□□□□ 0.44
RXRA-202ENST00000481739 NRBP1Q9UHY1 535 aa17.78■□□□□ 0.44
RXRA-202ENST00000481739 BMP3P12645 472 aa17.77■□□□□ 0.44
RXRA-202ENST00000481739 CLK2P49760 499 aaKnown RBP17.77■□□□□ 0.44
RXRA-202ENST00000481739 UBASH3AP57075 661 aa17.77■□□□□ 0.44
RXRA-202ENST00000481739 CCDC144BQ3MJ40 725 aa17.77■□□□□ 0.44
RXRA-202ENST00000481739 JAKMIP3Q5VZ66 844 aa17.77■□□□□ 0.44
RXRA-202ENST00000481739 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.44
RXRA-202ENST00000481739 RASSF8Q8NHQ8 419 aa17.77■□□□□ 0.44
RXRA-202ENST00000481739 COA7Q96BR5 231 aa17.77■□□□□ 0.44
RXRA-202ENST00000481739 PICK1Q9NRD5 415 aa17.77■□□□□ 0.44
RXRA-202ENST00000481739 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
RXRA-202ENST00000481739 BIN2Q9UBW5 565 aaPredicted RBP17.77■□□□□ 0.44
RXRA-202ENST00000481739 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.44
RXRA-202ENST00000481739 POTECB2RU33 542 aa17.77■□□□□ 0.43
RXRA-202ENST00000481739 ZNF18P17022 549 aa17.77■□□□□ 0.43
RXRA-202ENST00000481739 TMEM266Q2M3C6 531 aa17.77■□□□□ 0.43
RXRA-202ENST00000481739 SCYL3Q8IZE3 742 aa17.77■□□□□ 0.43
RXRA-202ENST00000481739 GLIS2Q9BZE0 524 aaPredicted RBP17.77■□□□□ 0.43
RXRA-202ENST00000481739 FANCLQ9NW38 375 aa17.77■□□□□ 0.43
RXRA-202ENST00000481739 NFE2L3Q9Y4A8 694 aa17.77■□□□□ 0.43
RXRA-202ENST00000481739 USP17L10C9JJH3 530 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 FXR2P51116 673 aaKnown RBP eCLIP17.76■□□□□ 0.43
RXRA-202ENST00000481739 IGSF22Q8N9C0 903 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 CACTINQ8WUQ7 758 aaKnown RBP17.76■□□□□ 0.43
RXRA-202ENST00000481739 VCPKMTQ9H867 229 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 PSTPIP2Q9H939 334 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 PYCARDQ9ULZ3 195 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 SSC5DA1L4H1 1573 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 WDR90Q96KV7 1748 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 DOCK1Q14185 1865 aa17.76■□□□□ 0.43
RXRA-202ENST00000481739 AP3B2Q13367 1082 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 KCNB1Q14721 858 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
RXRA-202ENST00000481739 CALCRLQ16602 461 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 SPATA1Q5VX52 437 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 FILIP1Q7Z7B0 1213 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 KLRG1Q96E93 195 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 PPP1R12BO60237 982 aaPredicted RBP17.75■□□□□ 0.43
RXRA-202ENST00000481739 PPP1R11O60927 126 aaPredicted RBP17.75■□□□□ 0.43
RXRA-202ENST00000481739 ATP1A3P13637 1013 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 HOXA7P31268 230 aaPredicted RBP17.75■□□□□ 0.43
RXRA-202ENST00000481739 NF2P35240 595 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 CUL4BQ13620 913 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 PDIA5Q14554 519 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 QRICH1Q2TAL8 776 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 ZNF658Q5TYW1 1059 aaPredicted RBP17.75■□□□□ 0.43
RXRA-202ENST00000481739 CABP7Q86V35 215 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 CDCA5Q96FF9 252 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 MTMR9Q96QG7 549 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 KBTBD4Q9NVX7 518 aa17.75■□□□□ 0.43
RXRA-202ENST00000481739 SYNRGQ9UMZ2 1314 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 SLC26A4O43511 780 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 USP2O75604 605 aaPredicted RBP17.74■□□□□ 0.43
RXRA-202ENST00000481739 PPP1R2P41236 205 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 KCNJ6P48051 423 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 AMPD3Q01432 767 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 FMR1Q06787 632 aaKnown RBP eCLIP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms