RNA–Protein interactions for RNA: ENST00000481710.5

SMIM11A-205, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-205ENST00000481710 DDX49Q9Y6V7 483 aaKnown RBP20.36■□□□□ 0.85
SMIM11A-205ENST00000481710 CYBAP13498 195 aa20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 STK3Q13188 491 aa20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 PPP2R5BQ15173 497 aa20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 MAMDC4Q6UXC1 1216 aa20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 NOL8Q76FK4 1167 aaKnown RBP20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 ZNF274Q96GC6 653 aaPredicted RBP20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 BACH2Q9BYV9 841 aa20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 HMX1Q9NP08 348 aaPredicted RBP20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 PAK6Q9NQU5 681 aaPredicted RBP20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 TPCN1Q9ULQ1 816 aa20.35■□□□□ 0.85
SMIM11A-205ENST00000481710 SYNGAP1Q96PV0 1343 aa20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 CCDC196A0A1B0GTZ2 297 aa20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 NTRK3Q16288 839 aa20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 PRAMEF19Q5SWL8 479 aa20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 RGS22Q8NE09 1264 aa20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 GPKOWQ92917 476 aaPredicted RBP eCLIP20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 TMEM106CQ9BVX2 250 aa20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 UPF2Q9HAU5 1272 aaKnown RBP20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 COL20A1Q9P218 1284 aa20.34■□□□□ 0.85
SMIM11A-205ENST00000481710 PPFIA3O75145 1194 aa20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 LARGE1O95461 756 aa20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 SNAI1O95863 264 aaPredicted RBP20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 CFBP00751 764 aa20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 ALDH5A1P51649 535 aaPredicted RBP20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 HSD17B4P51659 736 aa20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 GHRHRQ02643 423 aa20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 TRAF1Q13077 416 aa20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 ARMCX2Q7L311 632 aa20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 MCF2L2Q86YR7 1114 aa20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 MSL3Q8N5Y2 521 aaKnown RBP20.33■□□□□ 0.85
SMIM11A-205ENST00000481710 GJB1P08034 283 aa20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 ANKRD1Q15327 319 aa20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 WWC2Q6AWC2 1192 aa20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 HEATR3Q7Z4Q2 680 aa20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 SYTL5Q8TDW5 730 aaPredicted RBP20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 PHKBQ93100 1093 aa20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 SHISA4Q96DD7 197 aa20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 TBC1D32Q96NH3 1257 aa20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 DEFB118Q96PH6 123 aa20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 V9GY48 417 aaPredicted RBP20.32■□□□□ 0.84
SMIM11A-205ENST00000481710 HOXA13P31271 388 aaPredicted RBP20.31■□□□□ 0.84
SMIM11A-205ENST00000481710 SCRN1Q12765 414 aa20.31■□□□□ 0.84
SMIM11A-205ENST00000481710 TAAR1Q96RJ0 339 aa20.31■□□□□ 0.84
SMIM11A-205ENST00000481710 MAF1Q9H063 256 aa20.31■□□□□ 0.84
SMIM11A-205ENST00000481710 ASB14A6NK59 587 aa20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 PFKFB2O60825 505 aa20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 ZNF865P0CJ78 1059 aaPredicted RBP20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 IFNAR1P17181 557 aa20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 EN2P19622 333 aaPredicted RBP20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 CNGA1P29973 690 aa20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 TYW1BQ6NUM6 668 aa20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 U2AF1L4Q8WU68 220 aaKnown RBP20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 KATNBL1Q9H079 304 aa20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 ADD3Q9UEY8 706 aaKnown RBP20.3■□□□□ 0.84
SMIM11A-205ENST00000481710 GJA8P48165 433 aa20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 ME3Q16798 604 aa20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 DNERQ8NFT8 737 aa20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 MORC4Q8TE76 937 aa20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 SLC26A6Q9BXS9 759 aa20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 SLKQ9H2G2 1235 aaPredicted RBP20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 NRBP1Q9UHY1 535 aa20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 ZHX1Q9UKY1 873 aaPredicted RBP20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 CNPY2Q9Y2B0 182 aa20.29■□□□□ 0.84
SMIM11A-205ENST00000481710 MKI67P46013 3256 aaKnown RBP20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 GCOM1H8Y6P7 765 aaPredicted RBP20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 STXBP3O00186 592 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 SEPT4O43236 478 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 PRPF3O43395 683 aaKnown RBP20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 SGPL1O95470 568 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 POLR2MP0CAP2 368 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 ACVR2BQ13705 512 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 PKN1Q16512 942 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 PFKFB3Q16875 520 aaPredicted RBP20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 IFFO2Q5TF58 517 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 ANO1Q5XXA6 986 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 LHX8Q68G74 356 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 NECAB1Q8N987 351 aa20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 RNF26Q9BY78 433 aaPredicted RBP20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 DDX20Q9UHI6 824 aaKnown RBP20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 TNRC18O15417 2968 aaPredicted RBP20.28■□□□□ 0.84
SMIM11A-205ENST00000481710 CPLX1O14810 134 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 DTNBO60941 627 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 SCG2P13521 617 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 EDNRBP24530 442 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 NAPAP54920 295 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 RABEP1Q15276 862 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 FBXO16Q8IX29 292 aaPredicted RBP20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 SAMD3Q8N6K7 520 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 LENG1Q96BZ8 264 aaPredicted RBP20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 RMDN3Q96TC7 470 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 CRISPLD2Q9H0B8 497 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 ABHD16BQ9H3Z7 469 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 PXMP2Q9NR77 195 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 BARHL2Q9NY43 387 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 MAP3K20Q9NYL2 800 aaKnown RBP20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 ALPK3Q96L96 1907 aa20.27■□□□□ 0.84
SMIM11A-205ENST00000481710 DOCK5Q9H7D0 1870 aa20.26■□□□□ 0.83
SMIM11A-205ENST00000481710 LOC102724159A0A0B4J2E5 919 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms